RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 TRIM6Q9C030 488 aaPredicted RBP3.1□□□□□ -1.91
USP8-211ENST00000560527 SP140LQ9H930 580 aa3.1□□□□□ -1.91
USP8-211ENST00000560527 PLEKHA3Q9HB20 300 aa3.1□□□□□ -1.91
USP8-211ENST00000560527 KCNMB3Q9NPA1 279 aa3.1□□□□□ -1.91
USP8-211ENST00000560527 PIGVQ9NUD9 493 aa3.1□□□□□ -1.91
USP8-211ENST00000560527 DDX28Q9NUL7 540 aaKnown RBP3.1□□□□□ -1.91
USP8-211ENST00000560527 PAK5Q9P286 719 aa3.1□□□□□ -1.91
USP8-211ENST00000560527 TRMT6Q9UJA5 497 aaKnown RBP3.1□□□□□ -1.91
USP8-211ENST00000560527 RARRES3Q9UL19 164 aa3.1□□□□□ -1.91
USP8-211ENST00000560527 SPATA2Q9UM82 520 aa3.1□□□□□ -1.91
USP8-211ENST00000560527 NIP7Q9Y221 180 aaKnown RBP eCLIP3.1□□□□□ -1.91
USP8-211ENST00000560527 TDRKHQ9Y2W6 561 aaKnown RBP3.1□□□□□ -1.91
USP8-211ENST00000560527 TEX264Q9Y6I9 313 aa3.1□□□□□ -1.91
USP8-211ENST00000560527 SPAG9O60271 1321 aaKnown RBP3.1□□□□□ -1.91
USP8-211ENST00000560527 DHX29Q7Z478 1369 aaKnown RBP3.1□□□□□ -1.91
USP8-211ENST00000560527 TRGV8A0A0C4DH27 118 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 IGLON5A6NGN9 336 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 SLC9B1P1A6NJY1 282 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 ZNF724A8MTY0 619 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 TMCO5BA8MYB1 307 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 PDHXO00330 501 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 ZNF749O43361 778 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 B4GAT1O43505 415 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 VEGFDO43915 354 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 APRTP07741 180 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 ABHD2P08910 425 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 HMOX1P09601 288 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 TPBGLP0DKB5 382 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 B4GALT1P15291 398 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 AREGP15514 252 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 CD1DP15813 335 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 UGT1A6P19224 532 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 LMO2P25791 158 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 OXTRP30559 389 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 NSFP46459 744 aaKnown RBP3.09□□□□□ -1.91
USP8-211ENST00000560527 NT5C2P49902 561 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 NDUFV3P56181 108 aaKnown RBP3.09□□□□□ -1.91
USP8-211ENST00000560527 CCZ1BP86790 482 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 CCZ1P86791 482 aaPredicted RBP3.09□□□□□ -1.91
USP8-211ENST00000560527 AP1B1Q10567 949 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 CBX3Q13185 183 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 ECSCRQ19T08 205 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 MUC21Q5SSG8 566 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 NKAIN2Q5VXU1 208 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 ETFRF1Q6IPR1 90 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 TMUB2Q71RG4 321 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 MCM10Q7L590 875 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 GTSCR1Q86UQ5 136 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 CATSPER3Q86XQ3 398 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 PEX5LQ8IYB4 626 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 ABHD12Q8N2K0 398 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 BANPQ8N9N5 519 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 OR4L1Q8NH43 312 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 OR4A16Q8NH70 328 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 RASL10AQ92737 203 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 PCED1BQ96HM7 432 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 CDHR1Q96JP9 859 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 GPR137Q96N19 417 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 RUNDC3BQ96NL0 473 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 ANKRD27Q96NW4 1050 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 TAAR6Q96RI8 345 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 TNFRSF13CQ96RJ3 184 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 ATOH8Q96SQ7 321 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 DCTN5Q9BTE1 182 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 TEX13AQ9BXU3 409 aaPredicted RBP3.09□□□□□ -1.91
USP8-211ENST00000560527 UBXN6Q9BZV1 441 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 SLC26A1Q9H2B4 701 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 JPT2Q9H910 190 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 GDF3Q9NR23 364 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 AKAP7Q9P0M2 348 aaPredicted RBP3.09□□□□□ -1.91
USP8-211ENST00000560527 AUP1Q9Y679 476 aa3.09□□□□□ -1.91
USP8-211ENST00000560527 COL5A2P05997 1499 aaPredicted RBP3.09□□□□□ -1.92
USP8-211ENST00000560527 EEF2KO00418 725 aaKnown RBP3.08□□□□□ -1.92
USP8-211ENST00000560527 PI15O43692 258 aa3.08□□□□□ -1.92
USP8-211ENST00000560527 ZBTB14O43829 449 aa3.08□□□□□ -1.92
USP8-211ENST00000560527 NME2P1O60361 137 aa3.08□□□□□ -1.92
USP8-211ENST00000560527 TSPAN2O60636 221 aa3.08□□□□□ -1.92
USP8-211ENST00000560527 CSO75390 466 aaKnown RBP3.08□□□□□ -1.92
USP8-211ENST00000560527 OR6B1O95007 311 aa3.08□□□□□ -1.92
USP8-211ENST00000560527 IGHV3-13P01766 116 aa3.08□□□□□ -1.92
USP8-211ENST00000560527 P4HA1P13674 534 aa3.08□□□□□ -1.92
USP8-211ENST00000560527 PGFP49763 221 aa3.08□□□□□ -1.92
USP8-211ENST00000560527 CNN1P51911 297 aaKnown RBP3.08□□□□□ -1.92
USP8-211ENST00000560527 GEMP55040 296 aa3.08□□□□□ -1.92
USP8-211ENST00000560527 CASP9P55211 416 aa3.08□□□□□ -1.92
USP8-211ENST00000560527 SSTP61278 116 aa3.08□□□□□ -1.92
USP8-211ENST00000560527 RPL27P61353 136 aaKnown RBP3.08□□□□□ -1.92
USP8-211ENST00000560527 RPS27AP62979 156 aaKnown RBP3.08□□□□□ -1.92
USP8-211ENST00000560527 FCHO2Q0JRZ9 810 aa3.08□□□□□ -1.92
USP8-211ENST00000560527 ENPP2Q13822 863 aa3.08□□□□□ -1.92
USP8-211ENST00000560527 SLC17A1Q14916 467 aa3.08□□□□□ -1.92
USP8-211ENST00000560527 LPAL2Q16609 132 aa3.08□□□□□ -1.92
USP8-211ENST00000560527 WSCD2Q2TBF2 565 aa3.08□□□□□ -1.92
USP8-211ENST00000560527 EPC2Q52LR7 807 aa3.08□□□□□ -1.92
USP8-211ENST00000560527 DDI2Q5TDH0 399 aa3.08□□□□□ -1.92
USP8-211ENST00000560527 RHBDD2Q6NTF9 364 aa3.08□□□□□ -1.92
USP8-211ENST00000560527 DLEU7Q6UYE1 221 aa3.08□□□□□ -1.92
USP8-211ENST00000560527 Q6ZRG5 221 aa3.08□□□□□ -1.92
USP8-211ENST00000560527 GPRIN3Q6ZVF9 776 aa3.08□□□□□ -1.92
USP8-211ENST00000560527 NUFIP2Q7Z417 695 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms