RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 PCDHGA7Q9Y5G6 932 aa8.82□□□□□ -1
HERC1-206ENST00000559996 NUP214P35658 2090 aaPredicted RBP8.82□□□□□ -1
HERC1-206ENST00000559996 A0A088AWK7 358 aa8.81□□□□□ -1
HERC1-206ENST00000559996 LOC100653049A0A140TA62 436 aa8.81□□□□□ -1
HERC1-206ENST00000559996 MYOCOSA0A1B0GUC4 107 aa8.81□□□□□ -1
HERC1-206ENST00000559996 CCT8L1PA6NM43 557 aa8.81□□□□□ -1
HERC1-206ENST00000559996 MYO1GB0I1T2 1018 aa8.81□□□□□ -1
HERC1-206ENST00000559996 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.81□□□□□ -1
HERC1-206ENST00000559996 CTNSO60931 367 aa8.81□□□□□ -1
HERC1-206ENST00000559996 LDB3O75112 727 aa8.81□□□□□ -1
HERC1-206ENST00000559996 KRT34O76011 436 aa8.81□□□□□ -1
HERC1-206ENST00000559996 C1QCP02747 245 aa8.81□□□□□ -1
HERC1-206ENST00000559996 ALBP02768 609 aa8.81□□□□□ -1
HERC1-206ENST00000559996 FHP07954 510 aa8.81□□□□□ -1
HERC1-206ENST00000559996 ZGLP1P0C6A0 271 aa8.81□□□□□ -1
HERC1-206ENST00000559996 RNH1P13489 461 aaKnown RBP8.81□□□□□ -1
HERC1-206ENST00000559996 SPINK2P20155 84 aa8.81□□□□□ -1
HERC1-206ENST00000559996 ZNF10P21506 573 aaPredicted RBP8.81□□□□□ -1
HERC1-206ENST00000559996 F8A1P23610 371 aa8.81□□□□□ -1
HERC1-206ENST00000559996 XCR1P46094 333 aa8.81□□□□□ -1
HERC1-206ENST00000559996 GABREP78334 506 aa8.81□□□□□ -1
HERC1-206ENST00000559996 MAP7Q14244 749 aa8.81□□□□□ -1
HERC1-206ENST00000559996 KRT72Q14CN4 511 aa8.81□□□□□ -1
HERC1-206ENST00000559996 HEPACAMQ14CZ8 416 aa8.81□□□□□ -1
HERC1-206ENST00000559996 FAM174BQ3ZCQ3 159 aa8.81□□□□□ -1
HERC1-206ENST00000559996 VPS26BQ4G0F5 336 aa8.81□□□□□ -1
HERC1-206ENST00000559996 FAM69BQ5VUD6 431 aa8.81□□□□□ -1
HERC1-206ENST00000559996 CPZQ66K79 652 aa8.81□□□□□ -1
HERC1-206ENST00000559996 OR4F3Q6IEY1 312 aa8.81□□□□□ -1
HERC1-206ENST00000559996 DGAT2L6Q6ZPD8 337 aa8.81□□□□□ -1
HERC1-206ENST00000559996 OR4N5Q8IXE1 308 aa8.81□□□□□ -1
HERC1-206ENST00000559996 POU5F2Q8N7G0 328 aa8.81□□□□□ -1
HERC1-206ENST00000559996 GLB1L3Q8NCI6 653 aaPredicted RBP8.81□□□□□ -1
HERC1-206ENST00000559996 PLPP5Q8NEB5 264 aa8.81□□□□□ -1
HERC1-206ENST00000559996 STT3BQ8TCJ2 826 aa8.81□□□□□ -1
HERC1-206ENST00000559996 TSPEARQ8WU66 669 aa8.81□□□□□ -1
HERC1-206ENST00000559996 COL26A1Q96A83 441 aa8.81□□□□□ -1
HERC1-206ENST00000559996 CIDECQ96AQ7 238 aaPredicted RBP8.81□□□□□ -1
HERC1-206ENST00000559996 VPS33AQ96AX1 596 aa8.81□□□□□ -1
HERC1-206ENST00000559996 TBC1D20Q96BZ9 403 aa8.81□□□□□ -1
HERC1-206ENST00000559996 MIEF2Q96C03 454 aa8.81□□□□□ -1
HERC1-206ENST00000559996 OR1F2PQ96R84 312 aa8.81□□□□□ -1
HERC1-206ENST00000559996 MKKSQ9NPJ1 570 aaPredicted RBP8.81□□□□□ -1
HERC1-206ENST00000559996 SLC6A13Q9NSD5 602 aa8.81□□□□□ -1
HERC1-206ENST00000559996 TXLNGQ9NUQ3 528 aa8.81□□□□□ -1
HERC1-206ENST00000559996 EHD3Q9NZN3 535 aa8.81□□□□□ -1
HERC1-206ENST00000559996 SLAMF8Q9P0V8 285 aa8.81□□□□□ -1
HERC1-206ENST00000559996 PHF11Q9UIL8 331 aa8.81□□□□□ -1
HERC1-206ENST00000559996 PIEZO1Q92508 2521 aa8.8□□□□□ -1
HERC1-206ENST00000559996 A0A1W2PP18 115 aa8.8□□□□□ -1
HERC1-206ENST00000559996 TRABD2BA6NFA1 517 aa8.8□□□□□ -1
HERC1-206ENST00000559996 ST8SIA5O15466 376 aa8.8□□□□□ -1
HERC1-206ENST00000559996 B4GALT2O60909 372 aa8.8□□□□□ -1
HERC1-206ENST00000559996 GUCY1B2O75343 617 aa8.8□□□□□ -1
HERC1-206ENST00000559996 UBOX5O94941 541 aa8.8□□□□□ -1
HERC1-206ENST00000559996 CBX6O95503 412 aa8.8□□□□□ -1
HERC1-206ENST00000559996 GPR75O95800 540 aa8.8□□□□□ -1
HERC1-206ENST00000559996 CAPNS1P04632 268 aa8.8□□□□□ -1
HERC1-206ENST00000559996 IL6P05231 212 aa8.8□□□□□ -1
HERC1-206ENST00000559996 PGRP06401 933 aa8.8□□□□□ -1
HERC1-206ENST00000559996 UMODP07911 640 aa8.8□□□□□ -1
HERC1-206ENST00000559996 SNRPB2P08579 225 aaKnown RBP8.8□□□□□ -1
HERC1-206ENST00000559996 C8orf89P0DMQ9 161 aa8.8□□□□□ -1
HERC1-206ENST00000559996 NR2F6P10588 404 aa8.8□□□□□ -1
HERC1-206ENST00000559996 COX4I1P13073 169 aa8.8□□□□□ -1
HERC1-206ENST00000559996 EFNA1P20827 205 aaPredicted RBP8.8□□□□□ -1
HERC1-206ENST00000559996 S1PR1P21453 382 aa8.8□□□□□ -1
HERC1-206ENST00000559996 FBLP22087 321 aaKnown RBP8.8□□□□□ -1
HERC1-206ENST00000559996 IL10P22301 178 aa8.8□□□□□ -1
HERC1-206ENST00000559996 PRDX6P30041 224 aa8.8□□□□□ -1
HERC1-206ENST00000559996 CLNS1AP54105 237 aaKnown RBP8.8□□□□□ -1
HERC1-206ENST00000559996 FOLH1Q04609 750 aa8.8□□□□□ -1
HERC1-206ENST00000559996 SRSF11Q05519 484 aaKnown RBP8.8□□□□□ -1
HERC1-206ENST00000559996 MGAT2Q10469 447 aa8.8□□□□□ -1
HERC1-206ENST00000559996 FOXC1Q12948 553 aa8.8□□□□□ -1
HERC1-206ENST00000559996 RPS6KA2Q15349 733 aa8.8□□□□□ -1
HERC1-206ENST00000559996 C8orf82Q6P1X6 216 aaPredicted RBP8.8□□□□□ -1
HERC1-206ENST00000559996 C6orf15Q6UXA7 325 aaPredicted RBP8.8□□□□□ -1
HERC1-206ENST00000559996 DLEU7Q6UYE1 221 aa8.8□□□□□ -1
HERC1-206ENST00000559996 MSRB3Q8IXL7 192 aa8.8□□□□□ -1
HERC1-206ENST00000559996 ZNF595Q8IYB9 648 aa8.8□□□□□ -1
HERC1-206ENST00000559996 FAM9CQ8IZT9 166 aa8.8□□□□□ -1
HERC1-206ENST00000559996 CDC26Q8NHZ8 85 aa8.8□□□□□ -1
HERC1-206ENST00000559996 FBXO27Q8NI29 283 aa8.8□□□□□ -1
HERC1-206ENST00000559996 RP9Q8TA86 221 aaKnown RBP8.8□□□□□ -1
HERC1-206ENST00000559996 GTF2H4Q92759 462 aa8.8□□□□□ -1
HERC1-206ENST00000559996 TANKQ92844 425 aa8.8□□□□□ -1
HERC1-206ENST00000559996 NKD1Q969G9 470 aa8.8□□□□□ -1
HERC1-206ENST00000559996 FKBP10Q96AY3 582 aa8.8□□□□□ -1
HERC1-206ENST00000559996 SPDL1Q96EA4 605 aa8.8□□□□□ -1
HERC1-206ENST00000559996 DPH2Q9BQC3 489 aaPredicted RBP8.8□□□□□ -1
HERC1-206ENST00000559996 DUSP26Q9BV47 211 aa8.8□□□□□ -1
HERC1-206ENST00000559996 SCNM1Q9BWG6 230 aa8.8□□□□□ -1
HERC1-206ENST00000559996 RBCK1Q9BYM8 510 aa8.8□□□□□ -1
HERC1-206ENST00000559996 BHLHE41Q9C0J9 482 aaPredicted RBP8.8□□□□□ -1
HERC1-206ENST00000559996 VN1R1Q9GZP7 353 aa8.8□□□□□ -1
HERC1-206ENST00000559996 GLIPR2Q9H4G4 154 aa8.8□□□□□ -1
HERC1-206ENST00000559996 PRM3Q9NNZ6 103 aa8.8□□□□□ -1
HERC1-206ENST00000559996 SLC35C2Q9NQQ7 365 aa8.8□□□□□ -1
HERC1-206ENST00000559996 SIRT3Q9NTG7 399 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms