RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 BANF1O75531 89 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 CLEC3AO75596 197 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 WDR47O94967 919 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 LRATO95237 230 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 LY6G6DO95868 133 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 EPPINO95925 133 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 CD53P19397 219 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 CEACAM8P31997 349 aaPredicted RBP8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 TIMP3P35625 211 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 AGFG1P52594 562 aaKnown RBP8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 ZNF136P52737 540 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 DUSP8Q13202 625 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 SERTAD2Q14140 314 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 RCN2Q14257 317 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 C18orf21Q32NC0 220 aaPredicted RBP8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 ADPRMQ3LIE5 342 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 PIGGQ5H8A4 983 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 ABHD17CQ6PCB6 329 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 LYPD8Q6UX82 237 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 VN1R5Q7Z5H4 357 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 KIF18BQ86Y91 864 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 LACC1Q8IV20 430 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 C9orf40Q8IXQ3 194 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 VWA5B2Q8N398 1253 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 NAT8LQ8N9F0 302 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 FAM13CQ8NE31 585 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 OR10G3Q8NGC4 313 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 GABPB2Q8TAK5 448 aaPredicted RBP8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 NUBPLQ8TB37 319 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 SLC22A8Q8TCC7 542 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 PAQR8Q8TEZ7 354 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 MAGOHBQ96A72 148 aaKnown RBP8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 SPACA9Q96E40 222 aaPredicted RBP8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 EGFL8Q99944 293 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 YIPF4Q9BSR8 244 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 EPB41L4BQ9H329 900 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 COPS7BQ9H9Q2 264 aaPredicted RBP8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 PROK2Q9HC23 129 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 PPANQ9NQ55 473 aaKnown RBP8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 BEX4Q9NWD9 120 aaPredicted RBP8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 STAB1Q9NY15 2570 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 A0A1W2PPR1 153 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 ANKDD1BA6NHY2 528 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 FAM171A2A8MVW0 826 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 EEF1E1-BLOC1S5C9J1V9 151 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 HRKO00198 91 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 EEF1E1O43324 174 aaKnown RBP8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 IL2RAP01589 272 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 HRGP04196 525 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 ZNF37AP17032 561 aaPredicted RBP8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 GDF1P27539 372 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 GSTM2P28161 218 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 PCSK6P29122 969 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 HPDP32754 393 aaPredicted RBP8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 HNMTP50135 292 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 CRYZQ08257 329 aaKnown RBP8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 SPANXN3Q5MJ09 141 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 Q5PR19 223 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 SHEQ5VZ18 495 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 CXorf67Q86X51 503 aaPredicted RBP8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 OR4N5Q8IXE1 308 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 KRT78Q8N1N4 520 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 CIARTQ8N365 385 aaPredicted RBP8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 LRRN4CLQ8ND94 238 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 ANKRD9Q96BM1 317 aaPredicted RBP8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 HSPBAP1Q96EW2 488 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 CERS2Q96G23 380 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 PDLIM5Q96HC4 596 aaKnown RBP8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 SENP5Q96HI0 755 aaPredicted RBP8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 F2RL3Q96RI0 385 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 TIMP4Q99727 224 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 MAPKAP1Q9BPZ7 522 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 DOHHQ9BU89 302 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 LYRM4Q9HD34 91 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 LZTFL1Q9NQ48 299 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 PRDM7Q9NQW5 492 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 QPCTLQ9NXS2 382 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 CHCHD2Q9Y6H1 151 aaPredicted RBP8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 MED12Q93074 2177 aa8.29□□□□□ -1.08
HNRNPC-227ENST00000556897 NCF1BA6NI72 391 aaPredicted RBP8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 NCF1CA8MVU1 366 aaPredicted RBP8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 H7C1Q1 480 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 FGF17O60258 216 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 PRAMEF4O60810 478 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 TRAPPC6AO75865 159 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 TTC4O95801 387 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 C1QAP02745 245 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 IGKV3-11P04433 115 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 COX7A2P14406 83 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 NCF1P14598 390 aaPredicted RBP8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 SERPINB3P29508 390 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 MSH2P43246 934 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 STT3AP46977 705 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 SLC6A12P48065 614 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 KCNC1P48547 511 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 CDKL1Q00532 357 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 SORDQ00796 357 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 TGM3Q08188 693 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 TBL3Q12788 808 aaKnown RBP8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 ZNF460Q14592 562 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms