RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.95□□□□□ -0.66
ACTN1-221ENST00000556571 TLN2Q9Y4G6 2542 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 CDC7O00311 574 aa10.94□□□□□ -0.66
ACTN1-221ENST00000556571 WDR47O94967 919 aa10.94□□□□□ -0.66
ACTN1-221ENST00000556571 TBX6O95947 436 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-221ENST00000556571 IL2RAP01589 272 aa10.94□□□□□ -0.66
ACTN1-221ENST00000556571 COX7A2P14406 83 aa10.94□□□□□ -0.66
ACTN1-221ENST00000556571 PAFAH1B1P43034 410 aa10.94□□□□□ -0.66
ACTN1-221ENST00000556571 SF3B4Q15427 424 aaKnown RBP eCLIP10.94□□□□□ -0.66
ACTN1-221ENST00000556571 CYP1B1Q16678 543 aa10.94□□□□□ -0.66
ACTN1-221ENST00000556571 TEDDM1Q5T9Z0 273 aa10.94□□□□□ -0.66
ACTN1-221ENST00000556571 POMZP3Q6PJE2 187 aa10.94□□□□□ -0.66
ACTN1-221ENST00000556571 ADGRD1Q6QNK2 874 aa10.94□□□□□ -0.66
ACTN1-221ENST00000556571 CHSY3Q70JA7 882 aa10.94□□□□□ -0.66
ACTN1-221ENST00000556571 LACC1Q8IV20 430 aa10.94□□□□□ -0.66
ACTN1-221ENST00000556571 DND1Q8IYX4 353 aaKnown RBP10.94□□□□□ -0.66
ACTN1-221ENST00000556571 NKAPQ8N5F7 415 aaKnown RBP10.94□□□□□ -0.66
ACTN1-221ENST00000556571 SLC15A4Q8N697 577 aa10.94□□□□□ -0.66
ACTN1-221ENST00000556571 NAXEQ8NCW5 288 aa10.94□□□□□ -0.66
ACTN1-221ENST00000556571 SLC22A8Q8TCC7 542 aa10.94□□□□□ -0.66
ACTN1-221ENST00000556571 ZNF721Q8TF20 911 aa10.94□□□□□ -0.66
ACTN1-221ENST00000556571 CERS2Q96G23 380 aa10.94□□□□□ -0.66
ACTN1-221ENST00000556571 CAPZA3Q96KX2 299 aa10.94□□□□□ -0.66
ACTN1-221ENST00000556571 RUNDC3BQ96NL0 473 aa10.94□□□□□ -0.66
ACTN1-221ENST00000556571 ROGDIQ9GZN7 287 aa10.94□□□□□ -0.66
ACTN1-221ENST00000556571 SLC6A15Q9H2J7 730 aa10.94□□□□□ -0.66
ACTN1-221ENST00000556571 LYRM4Q9HD34 91 aa10.94□□□□□ -0.66
ACTN1-221ENST00000556571 PPANQ9NQ55 473 aaKnown RBP10.94□□□□□ -0.66
ACTN1-221ENST00000556571 RYDENQ9NUL5 291 aaKnown RBP10.94□□□□□ -0.66
ACTN1-221ENST00000556571 CNIH4Q9P003 139 aa10.94□□□□□ -0.66
ACTN1-221ENST00000556571 OARD1Q9Y530 152 aa10.94□□□□□ -0.66
ACTN1-221ENST00000556571 LRRC3CA6NJW4 275 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 DYRK3O43781 588 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 LDB3O75112 727 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 ETHE1O95571 254 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 HEXAP06865 529 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 ZNF37AP17032 561 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-221ENST00000556571 GDF5P43026 501 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 SLC6A12P48065 614 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 KCNC1P48547 511 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 TRPC1P48995 793 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 SORDQ00796 357 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 ACSF3Q4G176 576 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-221ENST00000556571 PRAMEF20Q5VT98 475 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 SHEQ5VZ18 495 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 TMEM198Q66K66 360 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 SRFBP1Q8NEF9 429 aaKnown RBP10.93□□□□□ -0.66
ACTN1-221ENST00000556571 SPACA9Q96E40 222 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-221ENST00000556571 ARSGQ96EG1 525 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 HSPBAP1Q96EW2 488 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 SENP5Q96HI0 755 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-221ENST00000556571 KCNC2Q96PR1 638 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 EHD1Q9H4M9 534 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 PRDM7Q9NQW5 492 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 BEX4Q9NWD9 120 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-221ENST00000556571 GPRC5BQ9NZH0 403 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 SLC17A6Q9P2U8 582 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 SPACA6W5XKT8 324 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 EML6Q6ZMW3 1958 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 COL6A5A8TX70 2615 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 HIVEP2P31629 2446 aa10.93□□□□□ -0.66
ACTN1-221ENST00000556571 C15orf38-AP3S2A0A0A6YYH1 394 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 NPEPPSL1A6NEC2 478 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 CLCA1A8K7I4 914 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 IGKV3-11P04433 115 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 SERPINB3P29508 390 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 STT3AP46977 705 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 ZNF136P52737 540 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 DCAF7P61962 342 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 NKX6-1P78426 367 aaPredicted RBP10.92□□□□□ -0.66
ACTN1-221ENST00000556571 DUSP8Q13202 625 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 BIKQ13323 160 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 PCBP2Q15366 365 aaKnown RBP eCLIP10.92□□□□□ -0.665e-6■■□□□ 13.6
ACTN1-221ENST00000556571 C18orf21Q32NC0 220 aaPredicted RBP10.92□□□□□ -0.66
ACTN1-221ENST00000556571 RNASEH2BQ5TBB1 312 aaKnown RBP10.92□□□□□ -0.66
ACTN1-221ENST00000556571 NSUN5P2Q63ZY6 315 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 LYPD8Q6UX82 237 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 FRA10AC1Q70Z53 315 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 VN1R5Q7Z5H4 357 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 ADAMTSL2Q86TH1 951 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 C9orf40Q8IXQ3 194 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 PM20D2Q8IYS1 436 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 FAM13CQ8NE31 585 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 LINC01560Q8TB33 94 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 ANKRD9Q96BM1 317 aaPredicted RBP10.92□□□□□ -0.66
ACTN1-221ENST00000556571 RHBDF1Q96CC6 855 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 RBM18Q96H35 190 aaKnown RBP10.92□□□□□ -0.66
ACTN1-221ENST00000556571 ART5Q96L15 291 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 JSRP1Q96MG2 331 aaPredicted RBP10.92□□□□□ -0.66
ACTN1-221ENST00000556571 F2RL3Q96RI0 385 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 TIMP4Q99727 224 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 MAPKAP1Q9BPZ7 522 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 YIPF4Q9BSR8 244 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 TBCDQ9BTW9 1192 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 ZNF395Q9H8N7 513 aaPredicted RBP10.92□□□□□ -0.66
ACTN1-221ENST00000556571 PROK2Q9HC23 129 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.92□□□□□ -0.66
ACTN1-221ENST00000556571 RNF14Q9UBS8 474 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 CTNNAL1Q9UBT7 734 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 ASIC3Q9UHC3 531 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms