RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 KIR2DS3Q14952 304 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 C15orf39Q6ZRI6 1047 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 DGLUCYQ7Z3D6 616 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 NUP43Q8NFH3 380 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 STOML3Q8TAV4 291 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 HOXB13Q92826 284 aaPredicted RBP10.29□□□□□ -0.76
ACTN1-216ENST00000556083 ERLEC1Q96DZ1 483 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 MMABQ96EY8 250 aaPredicted RBP10.29□□□□□ -0.76
ACTN1-216ENST00000556083 FUZQ9BT04 418 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 MARCH7Q9H992 704 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 EBF2Q9HAK2 575 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 CASC3O15234 703 aaKnown RBP10.28□□□□□ -0.76
ACTN1-216ENST00000556083 KCNK5O95279 499 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 CD3GP09693 182 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 HTR3AP46098 478 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 NKX3-2P78367 333 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 MC1RQ01726 317 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 HSD17B12Q53GQ0 312 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 ZNF517Q6ZMY9 492 aaPredicted RBP10.28□□□□□ -0.76
ACTN1-216ENST00000556083 LHFPL3Q86UP9 236 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 CARM1Q86X55 608 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 PM20D2Q8IYS1 436 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 CSNK1A1LQ8N752 337 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 ZNF283Q8N7M2 679 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 FAM110BQ8TC76 370 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 GATAD2BQ8WXI9 593 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 TANKQ92844 425 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 KLK6Q92876 244 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 SYT3Q9BQG1 590 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 SLC12A9Q9BXP2 914 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 OR51B5Q9H339 312 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 RNF11Q9Y3C5 154 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 DPPA5A6NC42 116 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 J3QLW9 94 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 SLC33A1O00400 549 aaPredicted RBP10.28□□□□□ -0.76
ACTN1-216ENST00000556083 YKT6O15498 198 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 TBX1O43435 398 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 TYROBPO43914 113 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 ADAMTS4O75173 837 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 TRAPPC6AO75865 159 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 ZNF19P17023 458 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 NDUFV2P19404 249 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 HNF1BP35680 557 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 ALKBH2Q6NS38 261 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 SLC2A7Q6PXP3 512 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 UBE2Q1Q7Z7E8 422 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 UBE2J2Q8N2K1 259 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 OR52N2Q8NGI0 321 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 NAT6Q93015 286 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 ESAMQ96AP7 390 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 BORCS6Q96GS4 357 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 GTPBP2Q9BX10 602 aaKnown RBP10.28□□□□□ -0.76
ACTN1-216ENST00000556083 OR8D2Q9GZM6 311 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 GPR160Q9UJ42 338 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 A0A0G2JMP0 313 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 PDLIM1O00151 329 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 LSM1O15116 133 aaKnown RBP10.28□□□□□ -0.76
ACTN1-216ENST00000556083 ALDOAP04075 364 aaKnown RBP10.28□□□□□ -0.76
ACTN1-216ENST00000556083 THEGLP0DJG4 465 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 ZNF35P13682 527 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 GALK1P51570 392 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 RAB8AP61006 207 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 ZNF181Q2M3W8 571 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 FAM76BQ5HYJ3 339 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 C5orf46Q6UWT4 87 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 DENND6BQ8NEG7 585 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 OR4M2Q8NGB6 313 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 NXPE3Q969Y0 559 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 RAB39BQ96DA2 213 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 SERINC2Q96SA4 455 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 DUSP23Q9BVJ7 150 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 CPEB1Q9BZB8 566 aaKnown RBP10.28□□□□□ -0.76
ACTN1-216ENST00000556083 RANBP3Q9H6Z4 567 aaPredicted RBP10.28□□□□□ -0.76
ACTN1-216ENST00000556083 CD93Q9NPY3 652 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 ZNF224Q9NZL3 707 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 STUB1Q9UNE7 303 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 TBX10O75333 385 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 STC2O76061 302 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 P04436 131 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 ZNF182P17025 639 aaPredicted RBP10.28□□□□□ -0.76
ACTN1-216ENST00000556083 TNFRSF4P43489 277 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 RIDAP52758 137 aaKnown RBP10.28□□□□□ -0.76
ACTN1-216ENST00000556083 CYCSP99999 105 aaKnown RBP10.28□□□□□ -0.76
ACTN1-216ENST00000556083 VEZF1Q14119 521 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 GINS1Q14691 196 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 PM20D1Q6GTS8 502 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 RNF130Q86XS8 419 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 CDRT4Q8N9R6 151 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 OR9A4Q8NGU2 314 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 SLC7A13Q8TCU3 470 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 ZFAND2BQ8WV99 257 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 PMM1Q92871 262 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 NKD1Q969G9 470 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 GAL3ST3Q96A11 431 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 TMEM41AQ96HV5 264 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 ZNF471Q9BX82 626 aaPredicted RBP10.28□□□□□ -0.76
ACTN1-216ENST00000556083 APOBEC3BQ9UH17 382 aaKnown RBP10.28□□□□□ -0.76
ACTN1-216ENST00000556083 HCN2Q9UL51 889 aa10.28□□□□□ -0.76
ACTN1-216ENST00000556083 H7C417 338 aa10.27□□□□□ -0.76
ACTN1-216ENST00000556083 RASAL1O95294 804 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms