RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 UBDO15205 165 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 OR10H2O60403 315 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 IFNA16P05015 189 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 UMODP07911 640 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 G6PDP11413 515 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 ICAM2P13598 275 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 TNNI3P19429 210 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 CSNK2A2P19784 350 aaPredicted RBP7.17□□□□□ -1.26
TDP1-214ENST00000556063 DDCP20711 480 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 MAOAP21397 527 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 IDH3AP50213 366 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 XKP51811 444 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 ARFIP2P53365 341 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 CLNS1AP54105 237 aaKnown RBP7.17□□□□□ -1.26
TDP1-214ENST00000556063 CLDN8P56748 225 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 OR4D2P58180 307 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 BTG2P78543 158 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 RHAGQ02094 409 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 TLE3Q04726 772 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 VAC14Q08AM6 782 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 CDC20Q12834 499 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 GSTA3Q16772 222 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 SLC9B1Q4ZJI4 515 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 VWA5B1Q5TIE3 1220 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 IRAK1BP1Q5VVH5 260 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 METTL21CQ5VZV1 264 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 FAM219BQ5XKK7 198 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 FAAH2Q6GMR7 532 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 FAM71E1Q6IPT2 247 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 SLC48A1Q6P1K1 146 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 TMEM205Q6UW68 189 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 MAVSQ7Z434 540 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 CPEB2Q7Z5Q1 589 aaKnown RBP7.17□□□□□ -1.26
TDP1-214ENST00000556063 CLNKQ7Z7G1 428 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 MRGPREQ86SM8 312 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 TICAM1Q8IUC6 712 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 SCUBE1Q8IWY4 988 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 NATD1Q8N6N6 113 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 TMEM102Q8N9M5 508 aaPredicted RBP7.17□□□□□ -1.26
TDP1-214ENST00000556063 DAZLQ92904 295 aaKnown RBP7.17□□□□□ -1.26
TDP1-214ENST00000556063 PPCDCQ96CD2 204 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 KLHL29Q96CT2 875 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 ZNF764Q96H86 408 aaPredicted RBP7.17□□□□□ -1.26
TDP1-214ENST00000556063 DGAT2Q96PD7 388 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 TSSK3Q96PN8 268 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 ZNF317Q96PQ6 595 aaPredicted RBP7.17□□□□□ -1.26
TDP1-214ENST00000556063 BBS4Q96RK4 519 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 ZBTB18Q99592 522 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 ALOXE3Q9BYJ1 711 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 DPY30Q9C005 99 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 RABEP2Q9H5N1 569 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 REEP4Q9H6H4 257 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 ADAP2Q9NPF8 381 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 SLC35C2Q9NQQ7 365 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 TEX10Q9NXF1 929 aaPredicted RBP7.17□□□□□ -1.26
TDP1-214ENST00000556063 TAS2R7Q9NYW3 318 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 SH3BP4Q9P0V3 963 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 KLHL14Q9P2G3 628 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 GIMAP2Q9UG22 337 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 UTS2RQ9UKP6 389 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 G3BP2Q9UN86 482 aaKnown RBP7.17□□□□□ -1.26
TDP1-214ENST00000556063 MRPS18BQ9Y676 258 aaKnown RBP7.17□□□□□ -1.26
TDP1-214ENST00000556063 MED13Q9UHV7 2174 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 LOC102723996A0A087X1L8 192 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 IGKV3D-11A0A0A0MRZ8 115 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 NSG1A0A0A6YYJ2 146 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 A0A1W2PQ72 361 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 TCRBV16S1A1N1A0A5B0 115 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 SRRM3A6NNA2 597 aaPredicted RBP7.16□□□□□ -1.26
TDP1-214ENST00000556063 K7ENP7 123 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 TAF4O00268 1085 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 PGRMC2O15173 223 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 NKX2-8O15522 239 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 AKAP10O43572 662 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 FGF17O60258 216 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 KLHL41O60662 606 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 TBX19O60806 448 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 LDB3O75112 727 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 ERAL1O75616 437 aaKnown RBP7.16□□□□□ -1.26
TDP1-214ENST00000556063 LRATO95237 230 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 HPP00738 406 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 FURINP09958 794 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 SLC35E2P0CK97 266 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 PRKAR1AP10644 381 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 CPMP14384 443 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 PORP16435 677 aaPredicted RBP7.16□□□□□ -1.26
TDP1-214ENST00000556063 TACR1P25103 407 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 NTSP30990 170 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 GALNSP34059 522 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 MPIP34949 423 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 STT3AP46977 705 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 HNRNPFP52597 415 aaKnown RBP7.16□□□□□ -1.26
TDP1-214ENST00000556063 GYS2P54840 703 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 DIO3P55073 304 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 C21orf58P58505 322 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 FOLH1Q04609 750 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 SRSF11Q05519 484 aaKnown RBP7.16□□□□□ -1.26
TDP1-214ENST00000556063 IL10RAQ13651 578 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 TERF2Q15554 542 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 ELAVL1Q15717 326 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms