RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 IKZF5Q9H5V7 419 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 TMEM45AQ9NWC5 275 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 UTS2RQ9UKP6 389 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 CES1P1Q9UKY3 287 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 PCDHA9Q9Y5H5 950 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 CLDN16Q9Y5I7 305 aa10.14□□□□□ -0.79
TDP1-211ENST00000555178 LDB3O75112 727 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 TNFSF15O95150 251 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 JMJD7P0C870 316 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 MSX2P35548 267 aaPredicted RBP10.13□□□□□ -0.79
TDP1-211ENST00000555178 MNAT1P51948 309 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 PSME3P61289 254 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 TRA2BP62995 288 aaKnown RBP10.13□□□□□ -0.79
TDP1-211ENST00000555178 SRSF11Q05519 484 aaKnown RBP10.13□□□□□ -0.79
TDP1-211ENST00000555178 ACTN3Q08043 901 aaPredicted RBP10.13□□□□□ -0.79
TDP1-211ENST00000555178 GAB1Q13480 694 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 IL11RAQ14626 422 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 NDUFA9Q16795 377 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 TRMT5Q32P41 509 aaKnown RBP10.13□□□□□ -0.79
TDP1-211ENST00000555178 RABL3Q5HYI8 236 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 RHBDD2Q6NTF9 364 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 ZNF551Q7Z340 670 aaPredicted RBP10.13□□□□□ -0.79
TDP1-211ENST00000555178 TMPRSS12Q86WS5 348 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 C10orf111Q8N326 155 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 FAM156AQ8NDB6 213 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 OR51Q1Q8NH59 317 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 TSPEARQ8WU66 669 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 ULBP3Q9BZM4 244 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 PAIP1Q9H074 479 aaKnown RBP10.13□□□□□ -0.79
TDP1-211ENST00000555178 FANCEQ9HB96 536 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 LYARQ9NX58 379 aaKnown RBP10.13□□□□□ -0.79
TDP1-211ENST00000555178 ACSL6Q9UKU0 697 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 A0A088AWK7 358 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 A0A1B0GX78 115 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 HOXB9P17482 250 aaPredicted RBP10.13□□□□□ -0.79
TDP1-211ENST00000555178 ZNF10P21506 573 aaPredicted RBP10.13□□□□□ -0.79
TDP1-211ENST00000555178 PPP2R1BP30154 601 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 FEN1P39748 380 aaKnown RBP10.13□□□□□ -0.79
TDP1-211ENST00000555178 SLC7A2P52569 658 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 MTPNP58546 118 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 HBA1P69905 142 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 GABREP78334 506 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 DMTNQ08495 405 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 FOXC1Q12948 553 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 HSPB3Q12988 150 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 DPY19L1Q2PZI1 675 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.13□□□□□ -0.79
TDP1-211ENST00000555178 GARNL3Q5VVW2 1013 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 SLC48A1Q6P1K1 146 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 R3HCC1LQ7Z5L2 792 aaKnown RBP10.13□□□□□ -0.79
TDP1-211ENST00000555178 DPP10Q8N608 796 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 PCYOX1LQ8NBM8 494 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 WDR36Q8NI36 951 aaKnown RBP10.13□□□□□ -0.79
TDP1-211ENST00000555178 PANX1Q96RD7 426 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 GPATCH1Q9BRR8 931 aaKnown RBP10.13□□□□□ -0.79
TDP1-211ENST00000555178 YIPF2Q9BWQ6 316 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 TRIM4Q9C037 500 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 BHLHE41Q9C0J9 482 aaPredicted RBP10.13□□□□□ -0.79
TDP1-211ENST00000555178 ROGDIQ9GZN7 287 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 C1orf21Q9H246 121 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 RPF2Q9H7B2 306 aaKnown RBP10.13□□□□□ -0.79
TDP1-211ENST00000555178 USP22Q9UPT9 525 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 WASF3Q9UPY6 502 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 PCDHB3Q9Y5E6 796 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 PCDHB14Q9Y5E9 798 aa10.13□□□□□ -0.79
TDP1-211ENST00000555178 C1orf226A1L170 272 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 MEN1O00255 615 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 RFXANKO14593 260 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 FGF17O60258 216 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 HNRNPCL1O60812 293 aaKnown RBP10.12□□□□□ -0.79
TDP1-211ENST00000555178 B4GALT2O60909 372 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 NME6O75414 186 aaPredicted RBP10.12□□□□□ -0.79
TDP1-211ENST00000555178 DNAJC8O75937 253 aaPredicted RBP10.12□□□□□ -0.79
TDP1-211ENST00000555178 STK17BO94768 372 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 SLC6A2P23975 617 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 SOX18P35713 384 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 SOX11P35716 441 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 PLA2G5P39877 138 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 BUD31P41223 144 aaPredicted RBP10.12□□□□□ -0.79
TDP1-211ENST00000555178 XCR1P46094 333 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 RASSF2P50749 326 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 CASP9P55211 416 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 FAM214AQ32MH5 1076 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 COQ5Q5HYK3 327 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 DGAT2L6Q6ZPD8 337 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 PGAM4Q8N0Y7 254 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 SIMC1Q8NDZ2 872 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 OR4A15Q8NGL6 344 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 OR5AK3PQ8NH89 298 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 SUN3Q8TAQ9 357 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 PNPT1Q8TCS8 783 aaKnown RBP10.12□□□□□ -0.79
TDP1-211ENST00000555178 STARD8Q92502 1023 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 COL26A1Q96A83 441 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 CCDC124Q96CT7 223 aaKnown RBP10.12□□□□□ -0.79
TDP1-211ENST00000555178 TAAR9Q96RI9 348 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 CDRT15Q96T59 188 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 PRPF18Q99633 342 aaKnown RBP10.12□□□□□ -0.79
TDP1-211ENST00000555178 FAIM2Q9BWQ8 316 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 CHST8Q9H2A9 424 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 ANKRA2Q9H9E1 313 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms