RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 SHBQ15464 509 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 TGFBIQ15582 683 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 SNRNP35Q16560 246 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.58□□□□□ -2
PRPF39-206ENST00000554429 HLA-BQ31612 363 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 WIPI1Q5MNZ9 446 aaPredicted RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 HES5Q5TA89 166 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 SEL1L2Q5TEA6 688 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PRAMEF5Q5TYX0 476 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PRAMEF9Q5VWM5 478 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PRAMEF6Q5VXH4 476 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 CST9LP1Q5W188 147 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 CPZQ66K79 652 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 KIAA0895LQ68EN5 471 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 SCARA3Q6AZY7 606 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ADNP2Q6IQ32 1131 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PYHIN1Q6K0P9 492 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 CDC73Q6P1J9 531 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 C3orf33Q6P1S2 294 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 FBXO42Q6P3S6 717 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 BRAT1Q6PJG6 821 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PCSK4Q6UW60 755 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 TMIGD1Q6UXZ0 262 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ETV3LQ6ZN32 361 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 EIF3MQ7L2H7 374 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 BHLHA9Q7RTU4 235 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 RD3Q7Z3Z2 195 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ADCK2Q7Z695 626 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 DPPA2Q7Z7J5 298 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 SCD5Q86SK9 330 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 FAM219AQ8IW50 185 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ZC3H3Q8IXZ2 948 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 TMEM116Q8NCL8 245 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 GALNT11Q8NCW6 608 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 RP9Q8TA86 221 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 HMGB4Q8WW32 186 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 NELFBQ8WX92 580 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 HAS2Q92819 552 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 WBP2Q969T9 261 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PTCD3Q96EY7 689 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 P2RY11Q96G91 374 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 LRR1Q96L50 414 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 CCNL2Q96S94 520 aaPredicted RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 OLFM1Q99784 485 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 KATNB1Q9BVA0 655 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PAPOLGQ9BWT3 736 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 POLDIP3Q9BY77 421 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 DPH1Q9BZG8 443 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 TRIM9Q9C026 710 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 TWSG1Q9GZX9 223 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 EPB41L4BQ9H329 900 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 RGCCQ9H4X1 137 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ASB8Q9H765 288 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 TM7SF3Q9NS93 570 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ABHD10Q9NUJ1 306 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 KCNK4Q9NYG8 393 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 MPP6Q9NZW5 540 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 KCMF1Q9P0J7 381 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 TNFRSF10DQ9UBN6 386 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PISDQ9UG56 409 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 SLCO3A1Q9UIG8 710 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 TRMT6Q9UJA5 497 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 ADAM18Q9Y3Q7 739 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 L3MBTL1Q9Y468 752 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ZNF451Q9Y4E5 1061 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PTGDR2Q9Y5Y4 395 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 DNAH14Q0VDD8 3507 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 A0A1B0GW15 77 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 CLEC18AA5D8T8 446 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 TBC1D3BA6NDS4 549 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 TRIM77I1YAP6 450 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 QSOX1O00391 747 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 AQP7O14520 342 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 TNFRSF10CO14798 259 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 AURKAO14965 403 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 CLIC2O15247 247 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 LATO43561 262 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 HCRTO43612 131 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 KLK8O60259 260 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PIAS1O75925 651 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ALX3O95076 343 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 NDUFA10O95299 355 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 AGTP01019 485 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 AHSGP02765 367 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 CFIP05156 583 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 RPLP1P05386 114 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 ENO1P06733 434 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 FCER2P06734 321 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 CHRM2P08172 466 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 OR4E1P0C645 316 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 LBPP18428 481 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 NR1D1P20393 614 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 DNASE1P24855 282 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 MMP12P39900 470 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 CASRP41180 1078 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PRCPP42785 496 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ASPAP45381 313 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 RIDAP52758 137 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 PLK1P53350 603 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 JAM2P57087 298 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms