RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 CCL26Q9Y258 94 aa5.67□□□□□ -1.5
VPS33B-203ENST00000554264 TESMINQ9Y4I5 508 aa5.67□□□□□ -1.5
VPS33B-203ENST00000554264 PCDHGA8Q9Y5G5 932 aa5.67□□□□□ -1.5
VPS33B-203ENST00000554264 PEX16Q9Y5Y5 336 aa5.67□□□□□ -1.5
VPS33B-203ENST00000554264 HS3ST4Q9Y661 456 aa5.67□□□□□ -1.5
VPS33B-203ENST00000554264 SPEGQ15772 3267 aa5.67□□□□□ -1.5
VPS33B-203ENST00000554264 IGF2RP11717 2491 aa5.67□□□□□ -1.5
VPS33B-203ENST00000554264 ASPMQ8IZT6 3477 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 EVPLLA8MZ36 301 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 CENPBD1B2RD01 187 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 E5RI56 91 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 LOC110117498-PIK3R3F6TDL0 507 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 BTN3A1O00481 513 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 CXCR6O00574 342 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 E2F3O00716 465 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 GPR39O43194 453 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 HCRTO43612 131 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 FOXS1O43638 330 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 ASNA1O43681 348 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 BRINP1O60477 761 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 JRKO75564 520 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 UPK1BO75841 260 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 NADKO95544 446 aaPredicted RBP5.66□□□□□ -1.5
VPS33B-203ENST00000554264 NFATC1O95644 943 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 KRT6AP02538 564 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 SLC4A1P02730 911 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 KRT6BP04259 564 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 HMBSP08397 361 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 EBLN1P0CF75 366 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 TRAPPC2P0DI81 140 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 TRAPPC2BP0DI82 140 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 CBSLP0DN79 551 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 CHRM3P20309 590 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 EFNA1P20827 205 aaPredicted RBP5.66□□□□□ -1.5
VPS33B-203ENST00000554264 FPR1P21462 350 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 LPOP22079 712 aaPredicted RBP5.66□□□□□ -1.5
VPS33B-203ENST00000554264 IGFBP5P24593 272 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 ACVR2AP27037 513 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 HTR1BP28222 390 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 ELK4P28324 431 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 S100A5P33763 92 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 SHMT2P34897 504 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 IDUAP35475 653 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 CBSP35520 551 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 DCTP40126 519 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 ETV6P41212 452 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 P2RY2P41231 377 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 GNPDA1P46926 289 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 PPP3CCP48454 512 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 GSSP48637 474 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 KRT6CP48668 564 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 TRPC1P48995 793 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 ALDH9A1P49189 494 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 DIO3P55073 304 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 OR4D2P58180 307 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 KRTAP10-2P60368 255 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 UFM1P61960 85 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 ADAM8P78325 824 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 SLC35A2P78381 396 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 MRPS21P82921 87 aaKnown RBP5.66□□□□□ -1.5
VPS33B-203ENST00000554264 BNC1Q01954 994 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 GNA12Q03113 381 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 CD47Q08722 323 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 TRAF3Q13114 568 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 ICAM4Q14773 271 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 TBCEQ15813 527 aaPredicted RBP5.66□□□□□ -1.5
VPS33B-203ENST00000554264 CYP2A13Q16696 494 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 DUOXA1Q1HG43 343 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 COL28A1Q2UY09 1125 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 ZNF404Q494X3 552 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 ANKDD1AQ495B1 522 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 FUT11Q495W5 492 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 RUNDC3AQ59EK9 446 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 ZNF789Q5FWF6 425 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 CT83Q5H943 113 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 PITRM1Q5JRX3 1037 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 PAGE3Q5JUK9 113 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 UBE2UQ5VVX9 321 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 LYSMD4Q5XG99 296 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 TXNDC8Q6A555 127 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 PNCKQ6P2M8 343 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 C19orf48Q6RUI8 117 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 TMEM207Q6UWW9 146 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 ISLR2Q6UXK2 745 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 ZNF783Q6ZMS7 281 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 FAM92BQ6ZTR7 304 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 PIWIL3Q7Z3Z3 882 aaKnown RBP5.66□□□□□ -1.5
VPS33B-203ENST00000554264 TMEM150AQ86TG1 271 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 SERPINA11Q86U17 422 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 GPR135Q8IZ08 494 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 ZNF683Q8IZ20 524 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 RYBPQ8N488 228 aaPredicted RBP5.66□□□□□ -1.5
VPS33B-203ENST00000554264 MDGA1Q8NFP4 955 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 OR10T2Q8NGX3 314 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 METTL6Q8TCB7 284 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 DYNC2LI1Q8TCX1 351 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 FAR1Q8WVX9 515 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 C17orf50Q8WW18 174 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 PIK3R3Q92569 461 aa5.66□□□□□ -1.5
VPS33B-203ENST00000554264 EXT2Q93063 718 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms