RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 LCTLQ6UWM7 567 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 RGS9BPQ6ZS82 235 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 SEM1Q6ZVN7 128 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 UBE2R2Q712K3 238 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-219ENST00000553488 WDR53Q7Z5U6 358 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-219ENST00000553488 SDCCAG8Q86SQ7 713 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-219ENST00000553488 C17orf64Q86WR6 236 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 GPALPP1Q8IXQ4 340 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 CPNE9Q8IYJ1 553 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 FAM109AQ8N4B1 249 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 TMEM156Q8N614 296 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 TMEM251Q8N6I4 163 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 NAXEQ8NCW5 288 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 ABHD11Q8NFV4 315 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 OR4K1Q8NGD4 311 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 OR10Q1Q8NGQ4 319 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 NT5CQ8TCD5 201 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 UTP15Q8TED0 518 aaKnown RBP6.73□□□□□ -1.33
ATXN3-219ENST00000553488 NCLNQ969V3 563 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 VMP1Q96GC9 406 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 SMIM10Q96HG1 83 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 HES6Q96HZ4 224 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 PDLIM2Q96JY6 352 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 AARSD1Q9BTE6 412 aaKnown RBP6.73□□□□□ -1.33
ATXN3-219ENST00000553488 AICDAQ9GZX7 198 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 PCBD2Q9H0N5 130 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 PLEKHF2Q9H8W4 249 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 INTS10Q9NVR2 710 aaKnown RBP6.73□□□□□ -1.33
ATXN3-219ENST00000553488 BFARQ9NZS9 450 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 PAK5Q9P286 719 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 SPRR3Q9UBC9 169 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 FBXW2Q9UKT8 454 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 AMFRQ9UKV5 643 aa6.73□□□□□ -1.33
ATXN3-219ENST00000553488 DSCAMO60469 2012 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 A0A1W2PPR1 153 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 TRBC2A0A5B9 178 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 A8MUA0 341 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 A8MVJ9 347 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 G3V3Y1 287 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 EIF3FO00303 357 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-219ENST00000553488 SYT5O00445 386 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 SLC16A5O15375 505 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 ZBTB14O43829 449 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 ZNF354AO60765 605 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-219ENST00000553488 OR2J2O76002 312 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 MYO1DO94832 1006 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 FTCDO95954 541 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 RNH1P13489 461 aaKnown RBP6.72□□□□□ -1.33
ATXN3-219ENST00000553488 NPPBP16860 134 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 PEX19P40855 299 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 SOX3P41225 446 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 NPY2RP49146 381 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 NAP1L1P55209 391 aaKnown RBP6.72□□□□□ -1.33
ATXN3-219ENST00000553488 SKP1P63208 163 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 TIAL1Q01085 375 aaKnown RBP eCLIP6.72□□□□□ -1.33
ATXN3-219ENST00000553488 PLGLB1Q02325 96 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 DAZAP2Q15038 168 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-219ENST00000553488 SIX1Q15475 284 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-219ENST00000553488 ZNF124Q15973 351 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 PHKG1Q16816 387 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 HYAL4Q2M3T9 481 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 XKR6Q5GH73 641 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 NDUFAF5Q5TEU4 345 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 ZNF470Q6ECI4 717 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 NIPAL1Q6NVV3 410 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 POMZP3Q6PJE2 187 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 AGTRAPQ6RW13 159 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 CLEC9AQ6UXN8 241 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 TAOK1Q7L7X3 1001 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 PEX26Q7Z412 305 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 STRA8Q7Z7C7 330 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 SLC22A16Q86VW1 577 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 DENND6AQ8IWF6 608 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 CA13Q8N1Q1 262 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 UBL4BQ8N7F7 174 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 ACRBPQ8NEB7 543 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 FAM222BQ8WU58 562 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 C1orf54Q8WWF1 131 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 OR4K3Q96R72 315 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 RASL10BQ96S79 203 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 GPR21Q99679 349 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 CNPPD1Q9BV87 410 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 FRMD8P1Q9BZ68 369 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-219ENST00000553488 ATG10Q9H0Y0 220 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 ACBD3Q9H3P7 528 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 HPF1Q9NWY4 346 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 TRMT1Q9NXH9 659 aaKnown RBP6.72□□□□□ -1.33
ATXN3-219ENST00000553488 B4GALT7Q9UBV7 327 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 ZFP69BQ9UJL9 534 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 ZNF148Q9UQR1 794 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 PDE10AQ9Y233 779 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 DRG1Q9Y295 367 aaKnown RBP6.72□□□□□ -1.33
ATXN3-219ENST00000553488 YARS2Q9Y2Z4 477 aaKnown RBP6.72□□□□□ -1.33
ATXN3-219ENST00000553488 DHRS7Q9Y394 339 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 MMACHCQ9Y4U1 282 aa6.72□□□□□ -1.33
ATXN3-219ENST00000553488 EPN1Q9Y6I3 576 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-219ENST00000553488 TCRBV7S3A2A0A539 114 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 KDM4EB2RXH2 506 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-219ENST00000553488 PFDN6O15212 129 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 NRDCO43847 1150 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms