RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 BUD31P41223 144 aaPredicted RBP18.46■□□□□ 0.55
RBFOX1-215ENST00000553186 NCBP2P52298 156 aaKnown RBP eCLIP18.46■□□□□ 0.55
RBFOX1-215ENST00000553186 GRAMD1BQ3KR37 738 aa18.46■□□□□ 0.55
RBFOX1-215ENST00000553186 AHCYL2Q96HN2 611 aaKnown RBP18.46■□□□□ 0.55
RBFOX1-215ENST00000553186 BBS4Q96RK4 519 aa18.46■□□□□ 0.55
RBFOX1-215ENST00000553186 EPB41L1Q9H4G0 881 aa18.46■□□□□ 0.55
RBFOX1-215ENST00000553186 MS4A12Q9NXJ0 267 aa18.46■□□□□ 0.55
RBFOX1-215ENST00000553186 PADI4Q9UM07 663 aa18.46■□□□□ 0.55
RBFOX1-215ENST00000553186 SCN3AQ9NY46 2000 aa18.46■□□□□ 0.55
RBFOX1-215ENST00000553186 CFIP05156 583 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 RAP2AP10114 183 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 FASP25445 335 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 PCGF2P35227 344 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 HOXD12P35452 270 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 FAM98BQ52LJ0 330 aaKnown RBP18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 C11orf65Q8NCR3 313 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 DUSP23Q9BVJ7 150 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 UGT2B28Q9BY64 529 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 ASPSCR1Q9BZE9 553 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 RAD21L1Q9H4I0 556 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 TMEM38AQ9H6F2 299 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 CAPN10Q9HC96 672 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 FRYLO94915 3013 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 TXNDC9O14530 226 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 MT-ND1P03886 318 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 C8orf89P0DMQ9 161 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 CD1CP29017 333 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 KDELR2P33947 212 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 FEN1P39748 380 aaKnown RBP18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 GTF2A1P52655 376 aaPredicted RBP18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 CRYBA2P53672 197 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 GPLD1P80108 840 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 EEF1A2Q05639 463 aaKnown RBP18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 CCDC116Q8IYX3 515 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 OR5T3Q8NGG3 340 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 OR4C6Q8NH72 309 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 PRDM9Q9NQV7 894 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 KLHL3Q9UH77 587 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 PSME2Q9UL46 239 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 ENTPD4Q9Y227 616 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 PCDH15Q96QU1 1955 aa18.45■□□□□ 0.54
RBFOX1-215ENST00000553186 SPEGQ15772 3267 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 FAM149AA5PLN7 773 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 PATE3B3GLJ2 98 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 CASC3O15234 703 aaKnown RBP18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 DUX1O43812 170 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 GCM2O75603 506 aaPredicted RBP18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 MED26O95402 600 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 ZBTB11O95625 1053 aaPredicted RBP18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 FCGR1AP12314 374 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 CSNK2A2P19784 350 aaPredicted RBP18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 CSF2RBP32927 897 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 MLLT3P42568 568 aaPredicted RBP18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 CCT3P49368 545 aaKnown RBP18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 CHRNB3Q05901 458 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 TAF11Q15544 211 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 AMZ1Q400G9 498 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 GCNT6Q5T4J0 391 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 C6orf120Q7Z4R8 191 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 EID3Q8N140 333 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 ANKFN1Q8N957 763 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 Q8N9G6 341 aaPredicted RBP18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 ZBTB44Q8NCP5 570 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 ZFP28Q8NHY6 868 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 GAREM1Q9H706 876 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 PDE7BQ9NP56 450 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 ZSCAN32Q9NX65 697 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 PLCL2Q9UPR0 1127 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 DTNAQ9Y4J8 743 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 LY6G6EA0A0G2JKS1 128 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 CYR61O00622 381 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 PTGER1P34995 402 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 AQP4P55087 323 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 SIM1P81133 766 aaPredicted RBP18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 RBBP4Q09028 425 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 GALNT10Q86SR1 603 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 PLXDC1Q8IUK5 500 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 CARFQ8N187 725 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 POP5Q969H6 163 aaKnown RBP18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 CENPNQ96H22 339 aaPredicted RBP18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 ZNF570Q96NI8 536 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 SOHLH2Q9NX45 425 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 TMEM9Q9P0T7 183 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 U3KQA8 63 aa18.44■□□□□ 0.54
RBFOX1-215ENST00000553186 TTC28Q96AY4 2481 aa18.43■□□□□ 0.54
RBFOX1-215ENST00000553186 ASXL3Q9C0F0 2248 aa18.43■□□□□ 0.54
RBFOX1-215ENST00000553186 SGK494L7N484 410 aa18.43■□□□□ 0.54
RBFOX1-215ENST00000553186 ALPPL2P10696 532 aa18.43■□□□□ 0.54
RBFOX1-215ENST00000553186 TLX1P31314 330 aaPredicted RBP18.43■□□□□ 0.54
RBFOX1-215ENST00000553186 MPIP34949 423 aa18.43■□□□□ 0.54
RBFOX1-215ENST00000553186 GPC1P35052 558 aa18.43■□□□□ 0.54
RBFOX1-215ENST00000553186 CCT8P50990 548 aa18.43■□□□□ 0.54
RBFOX1-215ENST00000553186 RPS26P62854 115 aaKnown RBP18.43■□□□□ 0.54
RBFOX1-215ENST00000553186 SPIDRQ14159 915 aa18.43■□□□□ 0.54
RBFOX1-215ENST00000553186 ATP6AP1Q15904 470 aa18.43■□□□□ 0.54
RBFOX1-215ENST00000553186 ZNF528Q3MIS6 628 aa18.43■□□□□ 0.54
RBFOX1-215ENST00000553186 SPDYE7PQ495Y7 208 aa18.43■□□□□ 0.54
RBFOX1-215ENST00000553186 LRRC23Q53EV4 343 aaPredicted RBP18.43■□□□□ 0.54
RBFOX1-215ENST00000553186 OR52E8Q6IFG1 317 aa18.43■□□□□ 0.54
RBFOX1-215ENST00000553186 USP53Q70EK8 1073 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms