RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 NDUFB4O95168 129 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 LETM1O95202 739 aaPredicted RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 PIGNO95427 931 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 SYF2O95926 243 aaKnown RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 HIST1H2ABP04908 130 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 UGT2B4P06133 528 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 CELA2AP08217 269 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 PLEKP08567 350 aaPredicted RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 KRT7P08729 469 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 FAM90A13PP0C7W8 464 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 FAM90A24PP0C7X0 464 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 TPBGLP0DKB5 382 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 NR2F1P10589 423 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 SFTPCP11686 197 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 FGF5P12034 268 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 CYP11B1P15538 503 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 TCF4P15884 667 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 GABRB1P18505 474 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 HIST1H2ADP20671 130 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 AGAP20933 346 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 GNLYP22749 145 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 RBMS1P29558 406 aaKnown RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 OR1E1P30953 314 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 RORAP35398 523 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 SYKP43405 635 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 ME1P48163 572 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 CAMPP49913 170 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 ENTPD1P49961 510 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 THOP1P52888 689 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 PMS2P54278 862 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 MFAP4P55083 255 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 YBEYP58557 167 aaPredicted RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 PPP1CAP62136 330 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 CDK3Q00526 305 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 SRSF4Q08170 494 aaKnown RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 ACSM2AQ08AH3 577 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 TRAF2Q12933 501 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 TRA2AQ13595 282 aaKnown RBP eCLIP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 BECN1Q14457 450 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 ESPL1Q14674 2120 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 ADIPOQQ15848 244 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 NADK2Q4G0N4 442 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 SGO1Q5FBB7 561 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 CXorf66Q5JRM2 361 aaPredicted RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 RABGAP1LQ5R372 815 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 WASHC2DQ5SRD0 308 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 PXDC1Q5TGL8 231 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 DCAF12L2Q5VW00 463 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 NKAIN2Q5VXU1 208 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 ACSM2BQ68CK6 577 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 TXNRD3NBQ6F5E7 133 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 KIAA0930Q6ICG6 404 aaPredicted RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 WDR59Q6PJI9 974 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 SLC2A7Q6PXP3 512 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 IGFL3Q6UXB1 125 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 LEKR1Q6ZMV7 388 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 TRILQ7L0X0 811 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 MON1BQ7L1V2 547 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 HIST3H2AQ7L7L0 130 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 LINGO2Q7L985 606 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 STRADAQ7RTN6 431 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 KRT74Q7RTS7 529 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 PTAR1Q7Z6K3 402 aaPredicted RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 DSG4Q86SJ6 1040 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 TSPAN33Q86UF1 283 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 VPS36Q86VN1 386 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 FAM131BQ86XD5 332 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 PRIMA1Q86XR5 153 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 PHF13Q86YI8 300 aaPredicted RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 ZDHHC17Q8IUH5 632 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 CCDC13Q8IYE1 715 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 EMC1Q8N766 993 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 RTL3Q8N8U3 475 aaKnown RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 OR6C4Q8NGE1 309 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 OR56A4Q8NGH8 313 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 C16orf52Q8NHV5 167 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 FLVCR1-AS1Q8TAF5 88 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 GABPB2Q8TAK5 448 aaPredicted RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 KIAA1524Q8TCG1 905 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 GANCQ8TET4 914 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 SLC20A1Q8WUM9 679 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 RXFP2Q8WXD0 754 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 ART4Q93070 314 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 C19orf60Q96EN9 201 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 SCRN2Q96FV2 425 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 ZNF641Q96N77 438 aaPredicted RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 ZNF396Q96N95 335 aaPredicted RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 PSKH2Q96QS6 385 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 TRIB3Q96RU7 358 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 IL12RB2Q99665 862 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 NRTNQ99748 197 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 DDX50Q9BQ39 737 aaKnown RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 FAM110AQ9BQ89 295 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 MGME1Q9BQP7 344 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 CRACR2AQ9BSW2 395 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 POLDIP3Q9BY77 421 aaKnown RBP2.25□□□□□ -2.05
CPSF6-207ENST00000551516 TRIM7Q9C029 511 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 ZYG11BQ9C0D3 744 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 SLC39A8Q9C0K1 460 aa2.25□□□□□ -2.05
CPSF6-207ENST00000551516 RAB33BQ9H082 229 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms