RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 FOLH1Q04609 750 aa15.15■□□□□ 0.02
VPS29-207ENST00000549970 C3P1Q6ZMU1 363 aa15.15■□□□□ 0.02
VPS29-207ENST00000549970 TAOK1Q7L7X3 1001 aa15.15■□□□□ 0.02
VPS29-207ENST00000549970 FGD2Q7Z6J4 655 aa15.15■□□□□ 0.02
VPS29-207ENST00000549970 LURAP1LQ8IV03 231 aa15.15■□□□□ 0.02
VPS29-207ENST00000549970 CTAGE4Q8IX94 777 aa15.15■□□□□ 0.02
VPS29-207ENST00000549970 ZFP62Q8NB50 900 aaPredicted RBP15.15■□□□□ 0.02
VPS29-207ENST00000549970 C16orf52Q8NHV5 167 aa15.15■□□□□ 0.02
VPS29-207ENST00000549970 ZNF721Q8TF20 911 aa15.15■□□□□ 0.02
VPS29-207ENST00000549970 ATP6V1E2Q96A05 226 aa15.15■□□□□ 0.02
VPS29-207ENST00000549970 ISL2Q96A47 359 aa15.15■□□□□ 0.02
VPS29-207ENST00000549970 PPWD1Q96BP3 646 aaKnown RBP15.15■□□□□ 0.02
VPS29-207ENST00000549970 PHF12Q96QT6 1004 aa15.15■□□□□ 0.02
VPS29-207ENST00000549970 ZNF717Q9BY31 904 aaPredicted RBP15.15■□□□□ 0.02
VPS29-207ENST00000549970 TSPYL1Q9H0U9 437 aa15.15■□□□□ 0.02
VPS29-207ENST00000549970 NOL11Q9H8H0 719 aaKnown RBP15.15■□□□□ 0.02
VPS29-207ENST00000549970 XPR1Q9UBH6 696 aa15.15■□□□□ 0.02
VPS29-207ENST00000549970 A0A1B0GTH9 108 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 G3V3Y1 287 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 OR7A17O14581 309 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 ZNF354AO60765 605 aaPredicted RBP15.14■□□□□ 0.01
VPS29-207ENST00000549970 EEDO75530 441 aaKnown RBP15.14■□□□□ 0.01
VPS29-207ENST00000549970 CLDN9O95484 217 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 RBP1P09455 135 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 TLX1P31314 330 aaPredicted RBP15.14■□□□□ 0.01
VPS29-207ENST00000549970 BSGP35613 385 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 BUD31P41223 144 aaPredicted RBP15.14■□□□□ 0.01
VPS29-207ENST00000549970 STT3AP46977 705 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 SERPINB9P50453 376 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 CCNG1P51959 295 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 SMSP52788 366 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 IGLV3-21P80748 117 aaPredicted RBP15.14■□□□□ 0.01
VPS29-207ENST00000549970 PLIN5Q00G26 463 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 ZNF750Q32MQ0 723 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 CMPK2Q5EBM0 449 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 XKRXQ6PP77 449 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 CYP20A1Q6UW02 462 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 DGAT2L6Q6ZPD8 337 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 DOLPP1Q86YN1 238 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 L3MBTL4Q8NA19 623 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 C7orf57Q8NEG2 295 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 OR52B6Q8NGF0 335 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 OR5L2Q8NGL0 311 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 OR8K3Q8NH51 312 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 WDR20Q8TBZ3 569 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 DOK4Q8TEW6 326 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 TANKQ92844 425 aa15.14■□□□□ 0.01
VPS29-207ENST00000549970 MTFMTQ96DP5 389 aaKnown RBP15.14■□□□□ 0.01
VPS29-207ENST00000549970 RBM18Q96H35 190 aaKnown RBP15.14■□□□□ 0.01
VPS29-207ENST00000549970 SENP5Q96HI0 755 aaPredicted RBP15.14■□□□□ 0.01
VPS29-207ENST00000549970 EML6Q6ZMW3 1958 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 A0A0A6YYD5 115 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 A0A0G2JMM0 328 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 A0A1W2PPB8 328 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 A0A1W2PRS3 328 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 PINLYPA6NC86 204 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 GLOD5A6NK44 160 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 KIR3DP1A8MWS1 328 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 TRIM49D1C9J1S8 452 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 HRKO00198 91 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 PROM1O43490 865 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 DYRK3O43781 588 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 TMPRSS11DO60235 418 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 SMIM24O75264 130 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 KRT38O76015 456 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 PDE9AO76083 593 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 GBAP04062 536 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 TPOP07202 933 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 PRF1P14222 555 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 ALOX15P16050 662 aaPredicted RBP15.13■□□□□ 0.01
VPS29-207ENST00000549970 PTGS2P35354 604 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 ARFIP1P53367 373 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 PLGLB1Q02325 96 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 ASPHQ12797 758 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 CUL3Q13618 768 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 ZNF630Q2M218 657 aaPredicted RBP15.13■□□□□ 0.01
VPS29-207ENST00000549970 TSNAXIP1Q2TAA8 658 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 METTL2BQ6P1Q9 378 aaKnown RBP15.13■□□□□ 0.01
VPS29-207ENST00000549970 CD163Q86VB7 1156 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 NUDT13Q86X67 352 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 TICAM1Q8IUC6 712 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 OR2M7Q8NG81 312 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 OR52N2Q8NGI0 321 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 NSUN5Q96P11 429 aaKnown RBP15.13■□□□□ 0.01
VPS29-207ENST00000549970 CNPPD1Q9BV87 410 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 DEFB127Q9H1M4 99 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 LYARQ9NX58 379 aaKnown RBP15.13■□□□□ 0.01
VPS29-207ENST00000549970 TMCO1Q9UM00 188 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 ASB4Q9Y574 426 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 CREBBPQ92793 2442 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 CSMD1Q96PZ7 3565 aa15.13■□□□□ 0.01
VPS29-207ENST00000549970 ZNF407Q9C0G0 2248 aa15.12■□□□□ 0.01
VPS29-207ENST00000549970 A0A087WUV0 522 aaPredicted RBP15.12■□□□□ 0.01
VPS29-207ENST00000549970 WASHC1A8K0Z3 465 aa15.12■□□□□ 0.01
VPS29-207ENST00000549970 FAM166BA8MTA8 275 aa15.12■□□□□ 0.01
VPS29-207ENST00000549970 STX16-NPEPL1H3BU86 382 aa15.12■□□□□ 0.01
VPS29-207ENST00000549970 FOXE1O00358 373 aaPredicted RBP15.12■□□□□ 0.01
VPS29-207ENST00000549970 STX16O14662 325 aa15.12■□□□□ 0.01
VPS29-207ENST00000549970 OR10H2O60403 315 aa15.12■□□□□ 0.01
VPS29-207ENST00000549970 SNRPB2P08579 225 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms