RNA–Protein interactions for RNA: ENST00000546718.5

USP15-206, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-206ENST00000546718 NEIL3Q8TAT5 605 aa13.31□□□□□ -0.28
USP15-206ENST00000546718 RNASE6Q93091 150 aaKnown RBP13.31□□□□□ -0.28
USP15-206ENST00000546718 RUNDC3BQ96NL0 473 aa13.31□□□□□ -0.28
USP15-206ENST00000546718 NAT9Q9BTE0 207 aa13.31□□□□□ -0.28
USP15-206ENST00000546718 PITHD1Q9GZP4 211 aaPredicted RBP13.31□□□□□ -0.28
USP15-206ENST00000546718 LYRM4Q9HD34 91 aa13.31□□□□□ -0.28
USP15-206ENST00000546718 ZFP64Q9NPA5 681 aa13.31□□□□□ -0.28
USP15-206ENST00000546718 COPS7AQ9UBW8 275 aa13.31□□□□□ -0.28
USP15-206ENST00000546718 EDARQ9UNE0 448 aa13.31□□□□□ -0.28
USP15-206ENST00000546718 CHCHD2Q9Y6H1 151 aaPredicted RBP13.31□□□□□ -0.28
USP15-206ENST00000546718 FBN1P35555 2871 aaKnown RBP13.31□□□□□ -0.28
USP15-206ENST00000546718 NCF1BA6NI72 391 aaPredicted RBP13.3□□□□□ -0.28
USP15-206ENST00000546718 NCF1CA8MVU1 366 aaPredicted RBP13.3□□□□□ -0.28
USP15-206ENST00000546718 DVL2O14641 736 aa13.3□□□□□ -0.28
USP15-206ENST00000546718 DNALI1O14645 258 aaPredicted RBP13.3□□□□□ -0.28
USP15-206ENST00000546718 FGF17O60258 216 aa13.3□□□□□ -0.28
USP15-206ENST00000546718 LRATO95237 230 aa13.3□□□□□ -0.28
USP15-206ENST00000546718 NCF1P14598 390 aaPredicted RBP13.3□□□□□ -0.28
USP15-206ENST00000546718 TNNI3P19429 210 aa13.3□□□□□ -0.28
USP15-206ENST00000546718 HOXC12P31275 282 aa13.3□□□□□ -0.28
USP15-206ENST00000546718 CEACAM8P31997 349 aaPredicted RBP13.3□□□□□ -0.28
USP15-206ENST00000546718 KCNC1P48547 511 aa13.3□□□□□ -0.28
USP15-206ENST00000546718 TRPC1P48995 793 aa13.3□□□□□ -0.28
USP15-206ENST00000546718 FNTAP49354 379 aa13.3□□□□□ -0.28
USP15-206ENST00000546718 TAS2R39P59534 338 aa13.3□□□□□ -0.28
USP15-206ENST00000546718 IGLV3-21P80748 117 aaPredicted RBP13.3□□□□□ -0.28
USP15-206ENST00000546718 SERTAD2Q14140 314 aa13.3□□□□□ -0.28
USP15-206ENST00000546718 RCN2Q14257 317 aa13.3□□□□□ -0.28
USP15-206ENST00000546718 SLC22A10Q63ZE4 541 aa13.3□□□□□ -0.28
USP15-206ENST00000546718 FRA10AC1Q70Z53 315 aa13.3□□□□□ -0.28
USP15-206ENST00000546718 ADAMTSL2Q86TH1 951 aa13.3□□□□□ -0.28
USP15-206ENST00000546718 ZC3HC1Q86WB0 502 aaKnown RBP13.3□□□□□ -0.28
USP15-206ENST00000546718 NKAPQ8N5F7 415 aaKnown RBP13.3□□□□□ -0.28
USP15-206ENST00000546718 OR10G3Q8NGC4 313 aa13.3□□□□□ -0.28
USP15-206ENST00000546718 NUBPLQ8TB37 319 aa13.3□□□□□ -0.28
USP15-206ENST00000546718 KIAA1191Q96A73 305 aa13.3□□□□□ -0.28
USP15-206ENST00000546718 SPACA9Q96E40 222 aaPredicted RBP13.3□□□□□ -0.28
USP15-206ENST00000546718 CFAP36Q96G28 342 aa13.3□□□□□ -0.28
USP15-206ENST00000546718 KCNC2Q96PR1 638 aa13.3□□□□□ -0.28
USP15-206ENST00000546718 EHD1Q9H4M9 534 aa13.3□□□□□ -0.28
USP15-206ENST00000546718 PLEKHF2Q9H8W4 249 aa13.3□□□□□ -0.28
USP15-206ENST00000546718 ACKR4Q9NPB9 350 aa13.3□□□□□ -0.28
USP15-206ENST00000546718 BOKQ9UMX3 212 aaPredicted RBP13.3□□□□□ -0.28
USP15-206ENST00000546718 CHMP2BQ9UQN3 213 aa13.3□□□□□ -0.28
USP15-206ENST00000546718 FAM95CA0A1B0GW59 222 aa13.29□□□□□ -0.28
USP15-206ENST00000546718 PGRMC1O00264 195 aaKnown RBP13.29□□□□□ -0.28
USP15-206ENST00000546718 RTCAO00442 366 aaKnown RBP13.29□□□□□ -0.28
USP15-206ENST00000546718 TAPBPO15533 448 aa13.29□□□□□ -0.28
USP15-206ENST00000546718 ATP5A1P25705 553 aaKnown RBP13.29□□□□□ -0.28
USP15-206ENST00000546718 HPDP32754 393 aaPredicted RBP13.29□□□□□ -0.28
USP15-206ENST00000546718 ELK3P41970 407 aa13.29□□□□□ -0.28
USP15-206ENST00000546718 ZNF136P52737 540 aa13.29□□□□□ -0.28
USP15-206ENST00000546718 CRYZQ08257 329 aaKnown RBP13.29□□□□□ -0.28
USP15-206ENST00000546718 DOC2AQ14183 400 aa13.29□□□□□ -0.28
USP15-206ENST00000546718 TGFBIQ15582 683 aa13.29□□□□□ -0.28
USP15-206ENST00000546718 STEAP4Q687X5 459 aa13.29□□□□□ -0.28
USP15-206ENST00000546718 OR4N5Q8IXE1 308 aa13.29□□□□□ -0.28
USP15-206ENST00000546718 ACOT4Q8N9L9 421 aa13.29□□□□□ -0.28
USP15-206ENST00000546718 SLC22A8Q8TCC7 542 aa13.29□□□□□ -0.28
USP15-206ENST00000546718 WDR34Q96EX3 536 aa13.29□□□□□ -0.28
USP15-206ENST00000546718 SENP5Q96HI0 755 aaPredicted RBP13.29□□□□□ -0.28
USP15-206ENST00000546718 C18orf12Q96KH6 178 aa13.29□□□□□ -0.28
USP15-206ENST00000546718 QPCTLQ9NXS2 382 aa13.29□□□□□ -0.28
USP15-206ENST00000546718 GPRC5BQ9NZH0 403 aa13.29□□□□□ -0.28
USP15-206ENST00000546718 CTNNAL1Q9UBT7 734 aa13.29□□□□□ -0.28
USP15-206ENST00000546718 CNOT11Q9UKZ1 510 aaKnown RBP13.29□□□□□ -0.28
USP15-206ENST00000546718 SCELO95171 688 aa13.28□□□□□ -0.28
USP15-206ENST00000546718 EPPINO95925 133 aa13.28□□□□□ -0.28
USP15-206ENST00000546718 FBXO45P0C2W1 286 aa13.28□□□□□ -0.28
USP15-206ENST00000546718 EPORP19235 508 aa13.28□□□□□ -0.28
USP15-206ENST00000546718 IVDP26440 423 aa13.28□□□□□ -0.28
USP15-206ENST00000546718 TIMP3P35625 211 aa13.28□□□□□ -0.28
USP15-206ENST00000546718 GGT5P36269 586 aa13.28□□□□□ -0.28
USP15-206ENST00000546718 STT3AP46977 705 aa13.28□□□□□ -0.28
USP15-206ENST00000546718 DUSP8Q13202 625 aa13.28□□□□□ -0.28
USP15-206ENST00000546718 KEAP1Q14145 624 aa13.28□□□□□ -0.28
USP15-206ENST00000546718 PPP1R7Q15435 360 aa13.28□□□□□ -0.28
USP15-206ENST00000546718 MAATS1Q7Z4T9 603 aa13.28□□□□□ -0.28
USP15-206ENST00000546718 LACC1Q8IV20 430 aa13.28□□□□□ -0.28
USP15-206ENST00000546718 FAM13CQ8NE31 585 aa13.28□□□□□ -0.28
USP15-206ENST00000546718 GRK7Q8WTQ7 553 aa13.28□□□□□ -0.28
USP15-206ENST00000546718 ESAMQ96AP7 390 aa13.28□□□□□ -0.28
USP15-206ENST00000546718 PPWD1Q96BP3 646 aaKnown RBP13.28□□□□□ -0.28
USP15-206ENST00000546718 ARSGQ96EG1 525 aa13.28□□□□□ -0.28
USP15-206ENST00000546718 PTCD3Q96EY7 689 aaKnown RBP13.28□□□□□ -0.28
USP15-206ENST00000546718 FBXL20Q96IG2 436 aa13.28□□□□□ -0.28
USP15-206ENST00000546718 PBKQ96KB5 322 aa13.28□□□□□ -0.28
USP15-206ENST00000546718 JSRP1Q96MG2 331 aaPredicted RBP13.28□□□□□ -0.28
USP15-206ENST00000546718 MCMBPQ9BTE3 642 aa13.28□□□□□ -0.28
USP15-206ENST00000546718 MS4A8Q9BY19 250 aa13.28□□□□□ -0.28
USP15-206ENST00000546718 DNAJC11Q9NVH1 559 aa13.28□□□□□ -0.28
USP15-206ENST00000546718 ZNF629Q9UEG4 869 aaPredicted RBP13.28□□□□□ -0.28
USP15-206ENST00000546718 MTRF1LQ9UGC7 380 aaKnown RBP13.28□□□□□ -0.28
USP15-206ENST00000546718 ASIC3Q9UHC3 531 aa13.28□□□□□ -0.28
USP15-206ENST00000546718 MPDZO75970 2070 aa13.27□□□□□ -0.28
USP15-206ENST00000546718 TLN2Q9Y4G6 2542 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 C15orf38-AP3S2A0A0A6YYH1 394 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 A0A1W2PPR1 153 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 TUBAL3A6NHL2 446 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 TRIM3O75382 744 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms