RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 MC1RQ01726 317 aa22.13■■□□□ 1.13
FOXA1-202ENST00000545425 ILKQ13418 452 aa22.13■■□□□ 1.13
FOXA1-202ENST00000545425 PTGES3Q15185 160 aaKnown RBP22.13■■□□□ 1.13
FOXA1-202ENST00000545425 SYT16Q17RD7 645 aa22.13■■□□□ 1.13
FOXA1-202ENST00000545425 HNRNPA1L2Q32P51 320 aaKnown RBP22.13■■□□□ 1.13
FOXA1-202ENST00000545425 ZNF770Q6IQ21 691 aaPredicted RBP22.13■■□□□ 1.13
FOXA1-202ENST00000545425 ADAMTSL4Q6UY14 1074 aa22.13■■□□□ 1.13
FOXA1-202ENST00000545425 TMEM184AQ6ZMB5 413 aa22.13■■□□□ 1.13
FOXA1-202ENST00000545425 ERN2Q76MJ5 926 aaKnown RBP22.13■■□□□ 1.13
FOXA1-202ENST00000545425 APOBEC4Q8WW27 367 aaKnown RBP22.13■■□□□ 1.13
FOXA1-202ENST00000545425 ZNF607Q96SK3 696 aa22.13■■□□□ 1.13
FOXA1-202ENST00000545425 FZD3Q9NPG1 666 aa22.13■■□□□ 1.13
FOXA1-202ENST00000545425 CD207Q9UJ71 328 aa22.13■■□□□ 1.13
FOXA1-202ENST00000545425 SH2B3Q9UQQ2 575 aa22.13■■□□□ 1.13
FOXA1-202ENST00000545425 KIAA1549LQ6ZVL6 1849 aa22.12■■□□□ 1.13
FOXA1-202ENST00000545425 PDPK1O15530 556 aa22.12■■□□□ 1.13
FOXA1-202ENST00000545425 MED26O95402 600 aa22.12■■□□□ 1.13
FOXA1-202ENST00000545425 PTTG1O95997 202 aa22.12■■□□□ 1.13
FOXA1-202ENST00000545425 OSMP13725 252 aa22.12■■□□□ 1.13
FOXA1-202ENST00000545425 CHMP24386 653 aa22.12■■□□□ 1.13
FOXA1-202ENST00000545425 SLC15A1P46059 708 aa22.12■■□□□ 1.13
FOXA1-202ENST00000545425 OR1E2P47887 323 aa22.12■■□□□ 1.13
FOXA1-202ENST00000545425 RHAGQ02094 409 aa22.12■■□□□ 1.13
FOXA1-202ENST00000545425 PLAG1Q6DJT9 500 aa22.12■■□□□ 1.13
FOXA1-202ENST00000545425 DSG4Q86SJ6 1040 aa22.12■■□□□ 1.13
FOXA1-202ENST00000545425 AQP11Q8NBQ7 271 aa22.12■■□□□ 1.13
FOXA1-202ENST00000545425 MSLNLQ96KJ4 702 aa22.12■■□□□ 1.13
FOXA1-202ENST00000545425 ALOXE3Q9BYJ1 711 aa22.12■■□□□ 1.13
FOXA1-202ENST00000545425 MS4A12Q9NXJ0 267 aa22.12■■□□□ 1.13
FOXA1-202ENST00000545425 CLEC1BQ9P126 229 aa22.12■■□□□ 1.13
FOXA1-202ENST00000545425 SLITRK5O94991 958 aa22.11■■□□□ 1.13
FOXA1-202ENST00000545425 STSP08842 583 aa22.11■■□□□ 1.13
FOXA1-202ENST00000545425 ADRB3P13945 408 aa22.11■■□□□ 1.13
FOXA1-202ENST00000545425 MAPK12P53778 367 aa22.11■■□□□ 1.13
FOXA1-202ENST00000545425 TSTA3Q13630 321 aaPredicted RBP22.11■■□□□ 1.13
FOXA1-202ENST00000545425 NDUFA9Q16795 377 aa22.11■■□□□ 1.13
FOXA1-202ENST00000545425 CEACAM20Q6UY09 585 aa22.11■■□□□ 1.13
FOXA1-202ENST00000545425 PTCHD4Q6ZW05 846 aa22.11■■□□□ 1.13
FOXA1-202ENST00000545425 VN1R5Q7Z5H4 357 aa22.11■■□□□ 1.13
FOXA1-202ENST00000545425 ZNF547Q8IVP9 402 aa22.11■■□□□ 1.13
FOXA1-202ENST00000545425 OR52J3Q8NH60 311 aa22.11■■□□□ 1.13
FOXA1-202ENST00000545425 ZBED6CLQ96FA7 236 aaPredicted RBP22.11■■□□□ 1.13
FOXA1-202ENST00000545425 MS4A8Q9BY19 250 aa22.11■■□□□ 1.13
FOXA1-202ENST00000545425 UCK2Q9BZX2 261 aa22.11■■□□□ 1.13
FOXA1-202ENST00000545425 DYRK4Q9NR20 520 aa22.11■■□□□ 1.13
FOXA1-202ENST00000545425 GPR83Q9NYM4 423 aa22.11■■□□□ 1.13
FOXA1-202ENST00000545425 ACSL6Q9UKU0 697 aa22.11■■□□□ 1.13
FOXA1-202ENST00000545425 ITM2BQ9Y287 266 aa22.11■■□□□ 1.13
FOXA1-202ENST00000545425 ASF1AQ9Y294 204 aa22.11■■□□□ 1.13
FOXA1-202ENST00000545425 IFT52Q9Y366 437 aa22.11■■□□□ 1.13
FOXA1-202ENST00000545425 GPR89AB7ZAQ6 455 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 LOC110117498-PIK3R3F6TDL0 507 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 PCDH17O14917 1159 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 GPR89BP0CG08 455 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 ANXA11P50995 505 aaKnown RBP22.1■■□□□ 1.13
FOXA1-202ENST00000545425 UGT2B15P54855 530 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 SMAD4Q13485 552 aaKnown RBP22.1■■□□□ 1.13
FOXA1-202ENST00000545425 Q6ZPB1 254 aaPredicted RBP22.1■■□□□ 1.13
FOXA1-202ENST00000545425 KRT73Q86Y46 540 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 RAB42Q8N4Z0 105 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 B3GNT7Q8NFL0 401 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 OR9Q2Q8NGE9 314 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 PIK3R3Q92569 461 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 ARRDC3Q96B67 414 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 COX14Q96I36 57 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 NECAB3Q96P71 396 aaPredicted RBP22.1■■□□□ 1.13
FOXA1-202ENST00000545425 CXorf36Q9H7Y0 433 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 NMNAT1Q9HAN9 279 aaPredicted RBP22.1■■□□□ 1.13
FOXA1-202ENST00000545425 ZBTB20Q9HC78 741 aaPredicted RBP22.1■■□□□ 1.13
FOXA1-202ENST00000545425 TAS2R7Q9NYW3 318 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 CRNNQ9UBG3 495 aaPredicted RBP22.1■■□□□ 1.13
FOXA1-202ENST00000545425 WDR37Q9Y2I8 494 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 DENND4AQ7Z401 1863 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 A0A075B6Q4 140 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 TMEM221A6NGB7 291 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 CCRL2O00421 344 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 IL9P15248 144 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 CCR8P51685 355 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 REEP5Q00765 189 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 ALDH6A1Q02252 535 aaKnown RBP22.1■■□□□ 1.13
FOXA1-202ENST00000545425 TPRG1LQ5T0D9 272 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 C9orf64Q5T6V5 341 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 SLX4IPQ5VYV7 408 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 KLHL17Q6TDP4 642 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 AMZ2Q86W34 360 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 SMPDL3AQ92484 453 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 ANKMY1Q9P2S6 941 aa22.1■■□□□ 1.13
FOXA1-202ENST00000545425 TNFRSF1BP20333 461 aa22.09■■□□□ 1.13
FOXA1-202ENST00000545425 MANFP55145 182 aaKnown RBP22.09■■□□□ 1.13
FOXA1-202ENST00000545425 NCF4Q15080 339 aa22.09■■□□□ 1.13
FOXA1-202ENST00000545425 TRIM74Q86UV6 250 aa22.09■■□□□ 1.13
FOXA1-202ENST00000545425 TRIM73Q86UV7 250 aa22.09■■□□□ 1.13
FOXA1-202ENST00000545425 NUDT13Q86X67 352 aa22.09■■□□□ 1.13
FOXA1-202ENST00000545425 LYSMD2Q8IV50 215 aa22.09■■□□□ 1.13
FOXA1-202ENST00000545425 ETFBKMTQ8IXQ9 262 aa22.09■■□□□ 1.13
FOXA1-202ENST00000545425 TM4SF18Q96CE8 201 aa22.09■■□□□ 1.13
FOXA1-202ENST00000545425 ZNF354BQ96LW1 612 aa22.09■■□□□ 1.13
FOXA1-202ENST00000545425 SPATA5L1Q9BVQ7 753 aa22.09■■□□□ 1.13
FOXA1-202ENST00000545425 HDAC8Q9BY41 377 aa22.09■■□□□ 1.13
FOXA1-202ENST00000545425 SPNS1Q9H2V7 528 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms