RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 PAX2Q02962 417 aa2.34□□□□□ -2.03
CCDC170-203ENST00000544131 EMC2Q15006 297 aa2.34□□□□□ -2.03
CCDC170-203ENST00000544131 PSMD6Q15008 389 aa2.34□□□□□ -2.03
CCDC170-203ENST00000544131 C14orf28Q4W4Y0 310 aa2.34□□□□□ -2.03
CCDC170-203ENST00000544131 ODF2Q5BJF6 829 aa2.34□□□□□ -2.03
CCDC170-203ENST00000544131 C9orf129Q5T035 196 aaKnown RBP2.34□□□□□ -2.03
CCDC170-203ENST00000544131 AGAP6Q5VW22 663 aa2.34□□□□□ -2.03
CCDC170-203ENST00000544131 UBQLNLQ8IYU4 475 aa2.34□□□□□ -2.03
CCDC170-203ENST00000544131 OR8H2Q8N162 312 aa2.34□□□□□ -2.03
CCDC170-203ENST00000544131 U2AF1L4Q8WU68 220 aaKnown RBP2.34□□□□□ -2.03
CCDC170-203ENST00000544131 C16orf58Q96GQ5 468 aa2.34□□□□□ -2.03
CCDC170-203ENST00000544131 SDHCQ99643 169 aaPredicted RBP2.34□□□□□ -2.03
CCDC170-203ENST00000544131 PAXXQ9BUH6 204 aa2.34□□□□□ -2.03
CCDC170-203ENST00000544131 IDI2Q9BXS1 227 aa2.34□□□□□ -2.03
CCDC170-203ENST00000544131 DPEP3Q9H4B8 488 aa2.34□□□□□ -2.03
CCDC170-203ENST00000544131 AMBNQ9NP70 447 aa2.34□□□□□ -2.03
CCDC170-203ENST00000544131 NTNG1Q9Y2I2 539 aa2.34□□□□□ -2.03
CCDC170-203ENST00000544131 RNF212BA8MTL3 300 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 LETM1O95202 739 aaPredicted RBP2.33□□□□□ -2.04
CCDC170-203ENST00000544131 FCGR3AP08637 254 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 CCDC159P0C7I6 412 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 TSPY3P0CV98 308 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 TSPY8P0CW00 308 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 P4HA1P13674 534 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 ELK1P19419 428 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 MAGEA9P43362 315 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 TNFRSF4P43489 277 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 ERVPABLB-1P60509 514 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 RPL27P61353 136 aaKnown RBP2.33□□□□□ -2.04
CCDC170-203ENST00000544131 CXCL6P80162 114 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 KIAA0040Q15053 153 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 PPP1R3AQ16821 1122 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 ANKRD55Q3KP44 614 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 KHDRBS2Q5VWX1 349 aaKnown RBP2.33□□□□□ -2.04
CCDC170-203ENST00000544131 CAPN13Q6MZZ7 669 aaPredicted RBP2.33□□□□□ -2.04
CCDC170-203ENST00000544131 CASC4Q6P4E1 433 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 FBXO16Q8IX29 292 aaPredicted RBP2.33□□□□□ -2.04
CCDC170-203ENST00000544131 OR1K1Q8NGR3 316 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 SETD6Q8TBK2 473 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 CCT8L2Q96SF2 557 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 C17orf62Q9BQA9 187 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 ATG101Q9BSB4 218 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 IL1RL2Q9HB29 575 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 TAS2R16Q9NYV7 291 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 SPG21Q9NZD8 308 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 EIF3KQ9UBQ5 218 aaKnown RBP2.33□□□□□ -2.04
CCDC170-203ENST00000544131 ABCG2Q9UNQ0 655 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 MOKQ9UQ07 419 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 PLEKHA6Q9Y2H5 1048 aa2.33□□□□□ -2.04
CCDC170-203ENST00000544131 CCSO14618 274 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 ST8SIA3O43173 380 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 KIAA0513O60268 411 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 PLOD3O60568 738 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 PDGFBP01127 241 aaPredicted RBP2.32□□□□□ -2.04
CCDC170-203ENST00000544131 ZFYP08048 801 aaPredicted RBP2.32□□□□□ -2.04
CCDC170-203ENST00000544131 CALML3P27482 149 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 PRKAR2BP31323 418 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 SOAT1P35610 550 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 NDST1P52848 882 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 PRKCEQ02156 737 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 LCP2Q13094 533 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 ISXQ2M1V0 245 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 WSCD1Q658N2 575 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 SIGLEC15Q6ZMC9 328 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 SLFN11Q7Z7L1 901 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 ZNF444Q8N0Y2 327 aaPredicted RBP2.32□□□□□ -2.04
CCDC170-203ENST00000544131 ARL14Q8N4G2 192 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 CCDC197Q8NCU1 140 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 VN1R17PQ8TDU5 208 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 CKAP2Q8WWK9 683 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 MRPL24Q96A35 216 aaKnown RBP2.32□□□□□ -2.04
CCDC170-203ENST00000544131 PCED1BQ96HM7 432 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 MAGEB18Q96M61 343 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 WWP1Q9H0M0 922 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 TNMDQ9H2S6 317 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 RNF41Q9H4P4 317 aaPredicted RBP2.32□□□□□ -2.04
CCDC170-203ENST00000544131 MRPL17Q9NRX2 175 aaKnown RBP2.32□□□□□ -2.04
CCDC170-203ENST00000544131 GPR173Q9NS66 373 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 PLEK2Q9NYT0 353 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 OR1A2Q9Y585 309 aa2.32□□□□□ -2.04
CCDC170-203ENST00000544131 WI2-2373I1.2A0A1W2PRP0 233 aa2.31□□□□□ -2.04
CCDC170-203ENST00000544131 EFCAB7A8K855 629 aa2.31□□□□□ -2.04
CCDC170-203ENST00000544131 ANXA9O76027 345 aa2.31□□□□□ -2.04
CCDC170-203ENST00000544131 PRAMEF12O95522 483 aa2.31□□□□□ -2.04
CCDC170-203ENST00000544131 APOA4P06727 396 aa2.31□□□□□ -2.04
CCDC170-203ENST00000544131 P0C879 139 aa2.31□□□□□ -2.04
CCDC170-203ENST00000544131 CCND3P30281 292 aaPredicted RBP2.31□□□□□ -2.04
CCDC170-203ENST00000544131 STX17P56962 302 aa2.31□□□□□ -2.04
CCDC170-203ENST00000544131 AKAP17AQ02040 695 aaKnown RBP2.31□□□□□ -2.04
CCDC170-203ENST00000544131 SLC3A1Q07837 685 aa2.31□□□□□ -2.04
CCDC170-203ENST00000544131 WDR25Q64LD2 544 aaPredicted RBP2.31□□□□□ -2.04
CCDC170-203ENST00000544131 SNRNP48Q6IEG0 339 aaKnown RBP2.31□□□□□ -2.04
CCDC170-203ENST00000544131 ZNF544Q6NX49 715 aa2.31□□□□□ -2.04
CCDC170-203ENST00000544131 ZNF530Q6P9A1 599 aaPredicted RBP2.31□□□□□ -2.04
CCDC170-203ENST00000544131 TRAT1Q6PIZ9 186 aa2.31□□□□□ -2.04
CCDC170-203ENST00000544131 ADGRD2Q7Z7M1 963 aa2.31□□□□□ -2.04
CCDC170-203ENST00000544131 FBXW8Q8N3Y1 598 aa2.31□□□□□ -2.04
CCDC170-203ENST00000544131 UXS1Q8NBZ7 420 aa2.31□□□□□ -2.04
CCDC170-203ENST00000544131 ICA1LQ8NDH6 482 aa2.31□□□□□ -2.04
CCDC170-203ENST00000544131 GANCQ8TET4 914 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms