RNA–Protein interactions for RNA: ENST00000542687.1

MRPL40P1-201, Transcript of mitochondrial ribosomal protein L40 pseudogene 1, humanhuman

BASIC

Gene MRPL40P1, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40P1-201ENST00000542687 ZNF595Q8IYB9 648 aa7.56□□□□□ -1.2
MRPL40P1-201ENST00000542687 C7orf57Q8NEG2 295 aa7.56□□□□□ -1.2
MRPL40P1-201ENST00000542687 DNAJB8Q8NHS0 232 aa7.56□□□□□ -1.2
MRPL40P1-201ENST00000542687 DNAJB14Q8TBM8 379 aa7.56□□□□□ -1.2
MRPL40P1-201ENST00000542687 MR1Q95460 341 aa7.56□□□□□ -1.2
MRPL40P1-201ENST00000542687 PMEPA1Q969W9 287 aa7.56□□□□□ -1.2
MRPL40P1-201ENST00000542687 CIDECQ96AQ7 238 aaPredicted RBP7.56□□□□□ -1.2
MRPL40P1-201ENST00000542687 RCN3Q96D15 328 aa7.56□□□□□ -1.2
MRPL40P1-201ENST00000542687 ZBED6CLQ96FA7 236 aaPredicted RBP7.56□□□□□ -1.2
MRPL40P1-201ENST00000542687 PANX1Q96RD7 426 aa7.56□□□□□ -1.2
MRPL40P1-201ENST00000542687 NPAS2Q99743 824 aa7.56□□□□□ -1.2
MRPL40P1-201ENST00000542687 RBCK1Q9BYM8 510 aa7.56□□□□□ -1.2
MRPL40P1-201ENST00000542687 B3GNT4Q9C0J1 378 aa7.56□□□□□ -1.2
MRPL40P1-201ENST00000542687 POLR1BQ9H9Y6 1135 aa7.56□□□□□ -1.2
MRPL40P1-201ENST00000542687 PRTFDC1Q9NRG1 225 aa7.56□□□□□ -1.2
MRPL40P1-201ENST00000542687 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.56□□□□□ -1.2
MRPL40P1-201ENST00000542687 C5AR2Q9P296 337 aa7.56□□□□□ -1.2
MRPL40P1-201ENST00000542687 GPN3Q9UHW5 284 aaPredicted RBP7.56□□□□□ -1.2
MRPL40P1-201ENST00000542687 BTNL2Q9UIR0 455 aa7.56□□□□□ -1.2
MRPL40P1-201ENST00000542687 PADI1Q9ULC6 663 aa7.56□□□□□ -1.2
MRPL40P1-201ENST00000542687 PCDHGA8Q9Y5G5 932 aa7.56□□□□□ -1.2
MRPL40P1-201ENST00000542687 ARID1BQ8NFD5 2236 aaPredicted RBP7.56□□□□□ -1.2
MRPL40P1-201ENST00000542687 ANKRD12Q6UB98 2062 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 EPG5Q9HCE0 2579 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 A0A1W2PNU3 283 aaPredicted RBP7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 PMS2P1A4D2B8 440 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 MYO1GB0I1T2 1018 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 C9orf172C9J069 976 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 C9J4A7 227 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 FBP2O00757 339 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 RFXANKO14593 260 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 NVLO15381 856 aaKnown RBP7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 ERN1O75460 977 aaKnown RBP7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 UNC5CO95185 931 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 KCNH1O95259 989 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 BMP10O95393 424 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 ANP32DO95626 131 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 CPSF4O95639 269 aaKnown RBP7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 ALBP02768 609 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 CD63P08962 238 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 C8orf89P0DMQ9 161 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 PORP16435 677 aaPredicted RBP7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 EFNA1P20827 205 aaPredicted RBP7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 GPC1P35052 558 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 FEN1P39748 380 aaKnown RBP7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 TRPC1P48995 793 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 NUDT2P50583 147 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 NCBP2P52298 156 aaKnown RBP eCLIP7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 HNRNPFP52597 415 aaKnown RBP7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 WNT3P56703 355 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 PCBP4P57723 403 aaKnown RBP7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 GABREP78334 506 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 ID2Q02363 134 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 FOLH1Q04609 750 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 STX4Q12846 297 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 BIKQ13323 160 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 NFYCQ13952 458 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 SERTAD2Q14140 314 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 MLC1Q15049 377 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 MINDY4Q4G0A6 757 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 LACTB2Q53H82 288 aaPredicted RBP7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 VWA2Q5GFL6 755 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 PAGE3Q5JUK9 113 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 ZNF385CQ66K41 422 aaPredicted RBP7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 FAM180BQ6P0A1 224 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 ZNF621Q6ZSS3 439 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 YTHDF3Q7Z739 585 aaKnown RBP7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 RETREG3Q86VR2 466 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 ANKRD46Q86W74 232 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 MARCH9Q86YJ5 346 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 ZC3H7AQ8IWR0 971 aaKnown RBP7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 PRSS58Q8IYP2 241 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 DPP10Q8N608 796 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 TRIML2Q8N7C3 387 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 GALNT6Q8NCL4 622 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 TMEM52Q8NDY8 209 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 OR4A15Q8NGL6 344 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 ZFP28Q8NHY6 868 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 OR5P2Q8WZ92 322 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 GTF2H4Q92759 462 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 ANKRD9Q96BM1 317 aaPredicted RBP7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 MIEF2Q96C03 454 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 ROPN1LQ96C74 230 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 CNRIP1Q96F85 164 aaPredicted RBP7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 RBM18Q96H35 190 aaKnown RBP7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 PTCHD1Q96NR3 888 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 CCDC115Q96NT0 180 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 TGIF2Q9GZN2 237 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 IL1RL2Q9HB29 575 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 SLC22A11Q9NSA0 550 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 ACSS1Q9NUB1 689 aaPredicted RBP7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 NDE1Q9NXR1 346 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 TAS2R9Q9NYW1 312 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 MAP10Q9P2G4 905 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 MAN2B2Q9Y2E5 1009 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 MMACHCQ9Y4U1 282 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 NCOR2Q9Y618 2525 aa7.55□□□□□ -1.2
MRPL40P1-201ENST00000542687 TP53BP1Q12888 1972 aaPredicted RBP7.54□□□□□ -1.2
MRPL40P1-201ENST00000542687 IGLV3-12A0A075B6K2 115 aa7.54□□□□□ -1.2
MRPL40P1-201ENST00000542687 A0A096LPI6 279 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms