RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 PSMA8Q8TAA3 256 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 N4BP2L2Q92802 583 aaPredicted RBP11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 THAP11Q96EK4 314 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 PYURFQ96I23 114 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 VPS50Q96JG6 964 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 MAGED4Q96JG8 741 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 HSH2DQ96JZ2 352 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 ZNF597Q96LX8 424 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 UGT2B28Q9BY64 529 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 UCK1Q9HA47 277 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 ACSS1Q9NUB1 689 aaPredicted RBP11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 UBAP1Q9NZ09 502 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 IGHV5-51A0A0C4DH38 117 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 PRAMEF25A6NGN4 478 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 TXNDC9O14530 226 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 DIRAS1O95057 198 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 UBTFL6P0CB48 400 aaPredicted RBP11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 NR2F6P10588 404 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 ALOX12P18054 663 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 TNFRSF1BP20333 461 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 TSFMP43897 325 aaKnown RBP11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 OR1D5P58170 312 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 TNFRSF17Q02223 184 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 ID2Q02363 134 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 RELAQ04206 551 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 CSTF1Q05048 431 aaKnown RBP11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 SCARB2Q14108 478 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 VEZF1Q14119 521 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 SPIDRQ14159 915 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 CYP27C1Q4G0S4 372 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 IQCCQ4KMZ1 466 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 LYSMD4Q5XG99 296 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 CBLL1Q75N03 491 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 TRIML2Q8N7C3 387 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 C11orf65Q8NCR3 313 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 SRFBP1Q8NEF9 429 aaKnown RBP11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 TMBIM1Q969X1 311 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 TAMM41Q96BW9 452 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 ZBED6CLQ96FA7 236 aaPredicted RBP11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 TGM7Q96PF1 710 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 SERINC2Q96SA4 455 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 BARD1Q99728 777 aaKnown RBP11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 IER2Q9BTL4 223 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 COL25A1Q9BXS0 654 aaPredicted RBP11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 NLNQ9BYT8 704 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 LYARQ9NX58 379 aaKnown RBP11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 TMEM9Q9P0T7 183 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 KLHL3Q9UH77 587 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 ZNF639Q9UID6 485 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 CNOT11Q9UKZ1 510 aaKnown RBP11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 CORO2BQ9UQ03 480 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 NAALAD2Q9Y3Q0 740 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 AP4B1Q9Y6B7 739 aa11.58□□□□□ -0.56
AP003559.1-201ENST00000540906 NCOR1O75376 2440 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 ADAMTS9Q9P2N4 1935 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 CACNA1EQ15878 2313 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 TMEM221A6NGB7 291 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 FAM227AF5H4B4 570 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 hCG_2039718K7EN88 272 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 SGK494L7N484 410 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 M0R296 226 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 EI24O14681 340 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 FKBP9O95302 570 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 KRT75O95678 551 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 ARAFP10398 606 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 FCGR1AP12314 374 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 CPN2P22792 545 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 ALDH4A1P30038 563 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 CCT3P49368 545 aaKnown RBP11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 VLDLRP98155 873 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 VAC14Q08AM6 782 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 TP53BP2Q13625 1128 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 SUZ12Q15022 739 aaKnown RBP11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 MLC1Q15049 377 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 PLK5Q496M5 336 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 CYBRD1Q53TN4 286 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 TMEM107Q6UX40 140 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 EIF3MQ7L2H7 374 aaKnown RBP11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 GATAD2AQ86YP4 633 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 MCATQ8IVS2 390 aaKnown RBP11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 ZC3H7AQ8IWR0 971 aaKnown RBP11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 CATSPER1Q8NEC5 780 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 OR5D16Q8NGK9 328 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 OR9A2Q8NGT5 310 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 RERGQ96A58 199 aaPredicted RBP11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 BTBD9Q96Q07 612 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 BBS4Q96RK4 519 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 YIPF4Q9BSR8 244 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 SPATA9Q9BWV2 254 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 TMEM38AQ9H6F2 299 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 SOX17Q9H6I2 414 aaPredicted RBP11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 LRIT1Q9P2V4 623 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 DAPP1Q9UN19 280 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 DMDP11532 3685 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 CABIN1Q9Y6J0 2220 aa11.57□□□□□ -0.56
AP003559.1-201ENST00000540906 CCDC163A0A0D9SF12 145 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 B4GAT1O43505 415 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 B3GALT2O43825 422 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 GALR3O60755 368 aaPredicted RBP11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 RASAL1O95294 804 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms