RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 C3orf14Q9HBI5 128 aa16.24■□□□□ 0.19
LTBR-207ENST00000539925 FBXW2Q9UKT8 454 aa16.24■□□□□ 0.19
LTBR-207ENST00000539925 CES1P1Q9UKY3 287 aa16.24■□□□□ 0.19
LTBR-207ENST00000539925 ORC6Q9Y5N6 252 aa16.24■□□□□ 0.19
LTBR-207ENST00000539925 SLC22A7Q9Y694 548 aa16.24■□□□□ 0.19
LTBR-207ENST00000539925 A6NHS1 94 aa16.23■□□□□ 0.19
LTBR-207ENST00000539925 H0YGG7 62 aa16.23■□□□□ 0.19
LTBR-207ENST00000539925 AQP9O43315 295 aa16.23■□□□□ 0.19
LTBR-207ENST00000539925 UBXN7O94888 489 aa16.23■□□□□ 0.19
LTBR-207ENST00000539925 SLITRK5O94991 958 aa16.23■□□□□ 0.19
LTBR-207ENST00000539925 FHP07954 510 aa16.23■□□□□ 0.19
LTBR-207ENST00000539925 MYF6P23409 242 aa16.23■□□□□ 0.19
LTBR-207ENST00000539925 PPP2R1BP30154 601 aa16.23■□□□□ 0.19
LTBR-207ENST00000539925 DNAJA1P31689 397 aaKnown RBP16.23■□□□□ 0.19
LTBR-207ENST00000539925 PXNP49023 591 aaPredicted RBP16.23■□□□□ 0.19
LTBR-207ENST00000539925 KHKP50053 298 aa16.23■□□□□ 0.19
LTBR-207ENST00000539925 AFF3P51826 1226 aaKnown RBP16.23■□□□□ 0.19
LTBR-207ENST00000539925 ITGA1P56199 1179 aa16.23■□□□□ 0.19
LTBR-207ENST00000539925 PCBP3P57721 371 aaKnown RBP16.23■□□□□ 0.19
LTBR-207ENST00000539925 ARF3P61204 181 aaPredicted RBP16.23■□□□□ 0.19
LTBR-207ENST00000539925 IFI44LQ53G44 452 aa16.23■□□□□ 0.19
LTBR-207ENST00000539925 TTC23Q5W5X9 447 aa16.23■□□□□ 0.19
LTBR-207ENST00000539925 ARMC8Q8IUR7 673 aa16.23■□□□□ 0.19
LTBR-207ENST00000539925 ARL14Q8N4G2 192 aa16.23■□□□□ 0.19
LTBR-207ENST00000539925 KCT2Q8NC54 265 aa16.23■□□□□ 0.19
LTBR-207ENST00000539925 NFKBIDQ8NI38 313 aa16.23■□□□□ 0.19
LTBR-207ENST00000539925 EPB41L1Q9H4G0 881 aa16.23■□□□□ 0.19
LTBR-207ENST00000539925 ERVMER34-1Q9H9K5 563 aa16.23■□□□□ 0.19
LTBR-207ENST00000539925 C3orf18Q9UK00 162 aa16.23■□□□□ 0.19
LTBR-207ENST00000539925 ACSL6Q9UKU0 697 aa16.23■□□□□ 0.19
LTBR-207ENST00000539925 C4orf51C9J302 202 aa16.22■□□□□ 0.19
LTBR-207ENST00000539925 K7ESF4 209 aa16.22■□□□□ 0.19
LTBR-207ENST00000539925 DLGAP1O14490 977 aa16.22■□□□□ 0.19
LTBR-207ENST00000539925 SRPX2O60687 465 aaPredicted RBP16.22■□□□□ 0.19
LTBR-207ENST00000539925 ERAL1O75616 437 aaKnown RBP16.22■□□□□ 0.19
LTBR-207ENST00000539925 IFI6P09912 130 aa16.22■□□□□ 0.19
LTBR-207ENST00000539925 THRBP10828 461 aa16.22■□□□□ 0.19
LTBR-207ENST00000539925 FPR1P21462 350 aa16.22■□□□□ 0.19
LTBR-207ENST00000539925 CPN2P22792 545 aa16.22■□□□□ 0.19
LTBR-207ENST00000539925 DCTP40126 519 aa16.22■□□□□ 0.19
LTBR-207ENST00000539925 RPS6KA3P51812 740 aa16.22■□□□□ 0.19
LTBR-207ENST00000539925 RAD23AP54725 363 aa16.22■□□□□ 0.19
LTBR-207ENST00000539925 EPHA4P54764 986 aa16.22■□□□□ 0.19
LTBR-207ENST00000539925 OTUD3Q5T2D3 398 aaPredicted RBP16.22■□□□□ 0.19
LTBR-207ENST00000539925 CARFQ8N187 725 aa16.22■□□□□ 0.19
LTBR-207ENST00000539925 MIPOL1Q8TD10 442 aa16.22■□□□□ 0.19
LTBR-207ENST00000539925 GEMIN6Q8WXD5 167 aaKnown RBP16.22■□□□□ 0.19
LTBR-207ENST00000539925 MAL2Q969L2 176 aa16.22■□□□□ 0.19
LTBR-207ENST00000539925 SLC35G5Q96KT7 338 aa16.22■□□□□ 0.19
LTBR-207ENST00000539925 SLC38A3Q99624 504 aa16.22■□□□□ 0.19
LTBR-207ENST00000539925 MACROD1Q9BQ69 325 aa16.22■□□□□ 0.19
LTBR-207ENST00000539925 YTHDF1Q9BYJ9 559 aaKnown RBP16.22■□□□□ 0.19
LTBR-207ENST00000539925 CHRNA10Q9GZZ6 450 aa16.22■□□□□ 0.19
LTBR-207ENST00000539925 RAB33BQ9H082 229 aa16.22■□□□□ 0.19
LTBR-207ENST00000539925 GABARAPL1Q9H0R8 117 aa16.22■□□□□ 0.19
LTBR-207ENST00000539925 P2RX2Q9UBL9 471 aa16.22■□□□□ 0.19
LTBR-207ENST00000539925 CSNK1G3Q9Y6M4 447 aa16.22■□□□□ 0.19
LTBR-207ENST00000539925 ADAMDEC1O15204 470 aa16.21■□□□□ 0.19
LTBR-207ENST00000539925 SMNDC1O75940 238 aaKnown RBP eCLIP16.21■□□□□ 0.19
LTBR-207ENST00000539925 CDH3P22223 829 aa16.21■□□□□ 0.19
LTBR-207ENST00000539925 CAPZBP47756 277 aa16.21■□□□□ 0.19
LTBR-207ENST00000539925 CDK9P50750 372 aaKnown RBP16.21■□□□□ 0.19
LTBR-207ENST00000539925 C16orf72Q14CZ0 275 aa16.21■□□□□ 0.19
LTBR-207ENST00000539925 PRAMEF8Q5VWM4 474 aa16.21■□□□□ 0.19
LTBR-207ENST00000539925 PRAMEF7Q5VXH5 474 aa16.21■□□□□ 0.19
LTBR-207ENST00000539925 CSNK1A1LQ8N752 337 aa16.21■□□□□ 0.19
LTBR-207ENST00000539925 C19orf47Q8N9M1 422 aaKnown RBP16.21■□□□□ 0.19
LTBR-207ENST00000539925 TCTN2Q96GX1 697 aa16.21■□□□□ 0.19
LTBR-207ENST00000539925 TPD52L3Q96J77 140 aa16.21■□□□□ 0.19
LTBR-207ENST00000539925 ZNF607Q96SK3 696 aa16.21■□□□□ 0.19
LTBR-207ENST00000539925 CD180Q99467 661 aa16.21■□□□□ 0.19
LTBR-207ENST00000539925 MAPKAP1Q9BPZ7 522 aa16.21■□□□□ 0.19
LTBR-207ENST00000539925 SPATA5L1Q9BVQ7 753 aa16.21■□□□□ 0.19
LTBR-207ENST00000539925 REEP1Q9H902 201 aa16.21■□□□□ 0.19
LTBR-207ENST00000539925 CLK4Q9HAZ1 481 aaKnown RBP16.21■□□□□ 0.19
LTBR-207ENST00000539925 THSD1Q9NS62 852 aa16.21■□□□□ 0.19
LTBR-207ENST00000539925 ZCCHC3Q9NUD5 404 aaKnown RBP16.21■□□□□ 0.19
LTBR-207ENST00000539925 UBAP1Q9NZ09 502 aa16.21■□□□□ 0.19
LTBR-207ENST00000539925 EPHA6Q9UF33 1036 aa16.21■□□□□ 0.19
LTBR-207ENST00000539925 DAPP1Q9UN19 280 aa16.21■□□□□ 0.19
LTBR-207ENST00000539925 SLCO1B1Q9Y6L6 691 aa16.21■□□□□ 0.19
LTBR-207ENST00000539925 TNRC18O15417 2968 aaPredicted RBP16.21■□□□□ 0.19
LTBR-207ENST00000539925 M0QX08 132 aa16.21■□□□□ 0.18
LTBR-207ENST00000539925 BCAT2O15382 392 aaPredicted RBP16.21■□□□□ 0.18
LTBR-207ENST00000539925 EMC8O43402 210 aa16.21■□□□□ 0.18
LTBR-207ENST00000539925 BMP10O95393 424 aa16.21■□□□□ 0.18
LTBR-207ENST00000539925 C1QCP02747 245 aa16.21■□□□□ 0.18
LTBR-207ENST00000539925 PROS1P07225 676 aa16.21■□□□□ 0.18
LTBR-207ENST00000539925 CDH2P19022 906 aaPredicted RBP16.21■□□□□ 0.18
LTBR-207ENST00000539925 KCNJ10P78508 379 aa16.21■□□□□ 0.18
LTBR-207ENST00000539925 PPP2R2BQ00005 443 aa16.21■□□□□ 0.18
LTBR-207ENST00000539925 TP53BP2Q13625 1128 aa16.21■□□□□ 0.18
LTBR-207ENST00000539925 KRT73Q86Y46 540 aa16.21■□□□□ 0.18
LTBR-207ENST00000539925 DEFB119Q8N690 84 aa16.21■□□□□ 0.18
LTBR-207ENST00000539925 CNRIP1Q96F85 164 aaPredicted RBP16.21■□□□□ 0.18
LTBR-207ENST00000539925 C7orf34Q96L11 122 aa16.21■□□□□ 0.18
LTBR-207ENST00000539925 EPYCQ99645 322 aa16.21■□□□□ 0.18
LTBR-207ENST00000539925 FAM192AQ9GZU8 254 aa16.21■□□□□ 0.18
LTBR-207ENST00000539925 KCMF1Q9P0J7 381 aa16.21■□□□□ 0.18
LTBR-207ENST00000539925 C5AR2Q9P296 337 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms