RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 GALNTL5Q7Z4T8 443 aa13.76□□□□□ -0.21
USP28-204ENST00000537642 NUDT13Q86X67 352 aa13.76□□□□□ -0.21
USP28-204ENST00000537642 TDRPQ86YL5 185 aa13.76□□□□□ -0.21
USP28-204ENST00000537642 CNPY4Q8N129 248 aa13.76□□□□□ -0.21
USP28-204ENST00000537642 TMEM178AQ8NBL3 297 aa13.76□□□□□ -0.21
USP28-204ENST00000537642 MYRIPQ8NFW9 859 aa13.76□□□□□ -0.21
USP28-204ENST00000537642 SLC2A12Q8TD20 617 aa13.76□□□□□ -0.21
USP28-204ENST00000537642 SREK1Q8WXA9 508 aaKnown RBP13.76□□□□□ -0.21
USP28-204ENST00000537642 UCN3Q969E3 161 aa13.76□□□□□ -0.21
USP28-204ENST00000537642 OR8D2Q9GZM6 311 aa13.76□□□□□ -0.21
USP28-204ENST00000537642 ELOVL6Q9H5J4 265 aa13.76□□□□□ -0.21
USP28-204ENST00000537642 LIN28AQ9H9Z2 209 aaKnown RBP13.76□□□□□ -0.21
USP28-204ENST00000537642 TRPS1Q9UHF7 1281 aa13.76□□□□□ -0.21
USP28-204ENST00000537642 EMCNQ9ULC0 261 aa13.76□□□□□ -0.21
USP28-204ENST00000537642 OSGIN2Q9Y236 505 aa13.76□□□□□ -0.21
USP28-204ENST00000537642 SLC5A6Q9Y289 635 aa13.76□□□□□ -0.21
USP28-204ENST00000537642 WIPF3A6NGB9 483 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 GLOD5A6NK44 160 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 SMIM23A6NLE4 172 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 CYSRT1A8MQ03 144 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 NME2P1O60361 137 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 SUPT7LO94864 414 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 AIFM1O95831 613 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 LDLRP01130 860 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 PDYNP01213 254 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 NR2F6P10588 404 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 IMPDH1P20839 514 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 NME2P22392 152 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 PRKAA2P54646 552 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 MAPKAPK3Q16644 382 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 HSDL2Q6YN16 418 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 DGAT2L6Q6ZPD8 337 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 SLC22A9Q8IVM8 553 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 METTL4Q8N3J2 472 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 C7orf57Q8NEG2 295 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 EPS8L3Q8TE67 593 aaKnown RBP13.75□□□□□ -0.21
USP28-204ENST00000537642 ZNF721Q8TF20 911 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 SELENOMQ8WWX9 145 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.75□□□□□ -0.21
USP28-204ENST00000537642 PPWD1Q96BP3 646 aaKnown RBP13.75□□□□□ -0.21
USP28-204ENST00000537642 FRMD6Q96NE9 622 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 DGAT2Q96PD7 388 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 MRPL1Q9BYD6 325 aaKnown RBP13.75□□□□□ -0.21
USP28-204ENST00000537642 DCDC2Q9UHG0 476 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 YARS2Q9Y2Z4 477 aaKnown RBP13.75□□□□□ -0.21
USP28-204ENST00000537642 MYO7BQ6PIF6 2116 aa13.75□□□□□ -0.21
USP28-204ENST00000537642 GLRA3O75311 464 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 OR2J2O76002 312 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 UNC5CO95185 931 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 GPR75O95800 540 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 KLK1P06870 262 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 COX7A2P14406 83 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 ALOX15P16050 662 aaPredicted RBP13.74□□□□□ -0.21
USP28-204ENST00000537642 SSR4P51571 173 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 HK2P52789 917 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 RNF4P78317 190 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 BIKQ13323 160 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 C4orf17Q53FE4 359 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 TCHHL1Q5QJ38 904 aaPredicted RBP13.74□□□□□ -0.21
USP28-204ENST00000537642 GFRALQ6UXV0 394 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.74□□□□□ -0.21
USP28-204ENST00000537642 CYP4Z2PQ8N1L4 340 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 TMEM156Q8N614 296 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 CDYL2Q8N8U2 506 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 TMEM125Q96AQ2 219 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 L3HYPDHQ96EM0 354 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 ZNF382Q96SR6 550 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 PPCSQ9HAB8 311 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 BRF2Q9HAW0 419 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 TEX10Q9NXF1 929 aaPredicted RBP13.74□□□□□ -0.21
USP28-204ENST00000537642 AHSPQ9NZD4 102 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 MYOTQ9UBF9 498 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 SEC14L3Q9UDX4 400 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 ADAM29Q9UKF5 820 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 SNX6Q9UNH7 406 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 SLC12A4Q9UP95 1085 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 DOPEY1Q5JWR5 2465 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 EML6Q6ZMW3 1958 aa13.74□□□□□ -0.21
USP28-204ENST00000537642 G3V2L1 256 aa13.73□□□□□ -0.21
USP28-204ENST00000537642 HRKO00198 91 aa13.73□□□□□ -0.21
USP28-204ENST00000537642 WWP2O00308 870 aa13.73□□□□□ -0.21
USP28-204ENST00000537642 MANBAO00462 879 aa13.73□□□□□ -0.21
USP28-204ENST00000537642 PGRMC2O15173 223 aa13.73□□□□□ -0.21
USP28-204ENST00000537642 LRRTM2O43300 516 aa13.73□□□□□ -0.21
USP28-204ENST00000537642 PROCP04070 461 aa13.73□□□□□ -0.21
USP28-204ENST00000537642 IGKV3-11P04433 115 aa13.73□□□□□ -0.21
USP28-204ENST00000537642 STSP08842 583 aa13.73□□□□□ -0.21
USP28-204ENST00000537642 GP1BBP13224 206 aa13.73□□□□□ -0.21
USP28-204ENST00000537642 KRT15P19012 456 aa13.73□□□□□ -0.21
USP28-204ENST00000537642 VSNL1P62760 191 aa13.73□□□□□ -0.21
USP28-204ENST00000537642 PLIN5Q00G26 463 aa13.73□□□□□ -0.21
USP28-204ENST00000537642 ALDH6A1Q02252 535 aaKnown RBP13.73□□□□□ -0.21
USP28-204ENST00000537642 GALNT1Q10472 559 aaPredicted RBP13.73□□□□□ -0.21
USP28-204ENST00000537642 TBL3Q12788 808 aaKnown RBP13.73□□□□□ -0.21
USP28-204ENST00000537642 RASA2Q15283 850 aa13.73□□□□□ -0.21
USP28-204ENST00000537642 ZYG11AQ6WRX3 759 aa13.73□□□□□ -0.21
USP28-204ENST00000537642 GPRIN3Q6ZVF9 776 aa13.73□□□□□ -0.21
USP28-204ENST00000537642 PAGE2Q7Z2X7 111 aa13.73□□□□□ -0.21
USP28-204ENST00000537642 COMMD6Q7Z4G1 85 aa13.73□□□□□ -0.21
USP28-204ENST00000537642 MDGA2Q7Z553 956 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms