RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 ARGLU1Q9NWB6 273 aaPredicted RBP21.23■□□□□ 0.99
SFSWAP-204ENST00000535399 SIRT5Q9NXA8 310 aa21.23■□□□□ 0.99
SFSWAP-204ENST00000535399 MCM8Q9UJA3 840 aa21.23■□□□□ 0.99
SFSWAP-204ENST00000535399 HEMK1Q9Y5R4 338 aaPredicted RBP21.23■□□□□ 0.99
SFSWAP-204ENST00000535399 PTGDR2Q9Y5Y4 395 aa21.23■□□□□ 0.99
SFSWAP-204ENST00000535399 TMEM120BA0PK00 339 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 GPR75O95800 540 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 SERPINE1P05121 402 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 GPR143P51810 404 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 BTKQ06187 659 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 ACSM2AQ08AH3 577 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 UGT3A2Q3SY77 523 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 ACSM2BQ68CK6 577 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 OR52E8Q6IFG1 317 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 GALNT18Q6P9A2 607 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 MMP21Q8N119 569 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 TMEM132CQ8N3T6 1108 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 ZADH2Q8N4Q0 377 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 APCDD1LQ8NCL9 501 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 C7orf57Q8NEG2 295 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 B3GNT7Q8NFL0 401 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 ARL8AQ96BM9 186 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 NPAS2Q99743 824 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 EPS8L2Q9H6S3 715 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 FIS1Q9Y3D6 152 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 TRAF6Q9Y4K3 522 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 PCDHA9Q9Y5H5 950 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 CSAG2Q9Y5P2 127 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 DNAJC15Q9Y5T4 150 aa21.22■□□□□ 0.99
SFSWAP-204ENST00000535399 A8MUI8 341 aa21.21■□□□□ 0.99
SFSWAP-204ENST00000535399 TMEM233B4DJY2 109 aa21.21■□□□□ 0.99
SFSWAP-204ENST00000535399 PCDH7O60245 1069 aa21.21■□□□□ 0.99
SFSWAP-204ENST00000535399 GUCY1B2O75343 617 aa21.21■□□□□ 0.99
SFSWAP-204ENST00000535399 RSL1D1O76021 490 aaKnown RBP21.21■□□□□ 0.99
SFSWAP-204ENST00000535399 STT3AP46977 705 aa21.21■□□□□ 0.99
SFSWAP-204ENST00000535399 WDR4P57081 412 aaKnown RBP21.21■□□□□ 0.99
SFSWAP-204ENST00000535399 TRA2BP62995 288 aaKnown RBP21.21■□□□□ 0.99
SFSWAP-204ENST00000535399 BIKQ13323 160 aa21.21■□□□□ 0.99
SFSWAP-204ENST00000535399 CHI3L2Q15782 390 aa21.21■□□□□ 0.99
SFSWAP-204ENST00000535399 IMPG1Q17R60 797 aa21.21■□□□□ 0.99
SFSWAP-204ENST00000535399 SPDYAQ5MJ70 313 aa21.21■□□□□ 0.99
SFSWAP-204ENST00000535399 AGBL2Q5U5Z8 902 aa21.21■□□□□ 0.99
SFSWAP-204ENST00000535399 SLC6A19Q695T7 634 aa21.21■□□□□ 0.99
SFSWAP-204ENST00000535399 FCRLBQ6BAA4 426 aa21.21■□□□□ 0.99
SFSWAP-204ENST00000535399 HDXQ7Z353 690 aa21.21■□□□□ 0.99
SFSWAP-204ENST00000535399 CLYBLQ8N0X4 340 aa21.21■□□□□ 0.99
SFSWAP-204ENST00000535399 ANKRD42Q8N9B4 389 aa21.21■□□□□ 0.99
SFSWAP-204ENST00000535399 DAZLQ92904 295 aaKnown RBP21.21■□□□□ 0.99
SFSWAP-204ENST00000535399 ZNF223Q9UK11 482 aaPredicted RBP21.21■□□□□ 0.99
SFSWAP-204ENST00000535399 NPIPB8E9PQR5 432 aa21.2■□□□□ 0.98
SFSWAP-204ENST00000535399 SLC28A1O00337 649 aa21.2■□□□□ 0.98
SFSWAP-204ENST00000535399 ALOX15P16050 662 aaPredicted RBP21.2■□□□□ 0.98
SFSWAP-204ENST00000535399 TIA1P31483 386 aaKnown RBP eCLIP21.2■□□□□ 0.981e-7■□□□□ 8.4
SFSWAP-204ENST00000535399 CASRP41180 1078 aa21.2■□□□□ 0.98
SFSWAP-204ENST00000535399 SLC18A1P54219 525 aa21.2■□□□□ 0.98
SFSWAP-204ENST00000535399 SH2D4BQ5SQS7 431 aa21.2■□□□□ 0.98
SFSWAP-204ENST00000535399 Q6ZS92 163 aa21.2■□□□□ 0.98
SFSWAP-204ENST00000535399 OR14A16Q8NHC5 309 aa21.2■□□□□ 0.98
SFSWAP-204ENST00000535399 PPP1R14CQ8TAE6 165 aa21.2■□□□□ 0.98
SFSWAP-204ENST00000535399 NCLNQ969V3 563 aa21.2■□□□□ 0.98
SFSWAP-204ENST00000535399 DGAT2Q96PD7 388 aa21.2■□□□□ 0.98
SFSWAP-204ENST00000535399 ZNF395Q9H8N7 513 aaPredicted RBP21.2■□□□□ 0.98
SFSWAP-204ENST00000535399 ZDHHC2Q9UIJ5 367 aa21.2■□□□□ 0.98
SFSWAP-204ENST00000535399 CES1P1Q9UKY3 287 aa21.2■□□□□ 0.98
SFSWAP-204ENST00000535399 CLCA3PQ9Y6N3 262 aa21.2■□□□□ 0.98
SFSWAP-204ENST00000535399 CNTRLQ7Z7A1 2325 aa21.2■□□□□ 0.98
SFSWAP-204ENST00000535399 A0A1W2PS29 197 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 C17orf105B2RV13 164 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 ITM2AO43736 263 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 MAN1A2O60476 641 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 LYPLA1O75608 230 aaPredicted RBP21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 DDAH2O95865 285 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 CHEK2O96017 543 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 UQCRHP07919 91 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 PRPH2P23942 346 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 TAS2R50P59544 299 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 ACER2Q5QJU3 275 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 ABHD17BQ5VST6 288 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 DGAT2L6Q6ZPD8 337 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 Q6ZSR9 355 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 CRLF3Q8IUI8 442 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 HOMEZQ8IX15 550 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 SLC5A8Q8N695 610 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 Q8NA96 180 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 MORN4Q8NDC4 146 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 OR2T11Q8NH01 316 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 AGR3Q8TD06 166 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 TWIST2Q8WVJ9 160 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 PNPLA2Q96AD5 504 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 PPWD1Q96BP3 646 aaKnown RBP21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 VMP1Q96GC9 406 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 ZNF354BQ96LW1 612 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 EBPLQ9BY08 206 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 PLA2G3Q9NZ20 509 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 TEKT2Q9UIF3 430 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 B3GNT3Q9Y2A9 372 aa21.19■□□□□ 0.98
SFSWAP-204ENST00000535399 TRBV11-1A0A0K0K1C0 115 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 C1orf226A1L170 272 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 TMEM114B3SHH9 223 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 SORBS2O94875 1100 aaKnown RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms