RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 FBXL5Q9UKA1 691 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 CDH7Q9ULB5 785 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 LIPT1Q9Y234 373 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 ITM2BQ9Y287 266 aa3.8□□□□□ -1.8
PRKDC-205ENST00000535375 FAM168BA1KXE4 195 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 MAGEB16A2A368 324 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 SDR42E2A6NKP2 422 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 ZNF487B1APH4 448 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 PSMA7O14818 248 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 SYT7O43581 403 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 STX6O43752 255 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 ATP9AO75110 1047 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 ZNF253O75346 499 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 CSO75390 466 aaKnown RBP3.79□□□□□ -1.8
PRKDC-205ENST00000535375 HSD17B1P14061 328 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 PPP2R1BP30154 601 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 IST1P53990 364 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 HMGCS2P54868 508 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 SLC34A1Q06495 639 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 CCL14Q16627 93 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 LRRC38Q5VT99 294 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 CAPN13Q6MZZ7 669 aaPredicted RBP3.79□□□□□ -1.8
PRKDC-205ENST00000535375 PLBD1Q6P4A8 553 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 PODNL1Q6PEZ8 512 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 SIGLEC15Q6ZMC9 328 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 SNX32Q86XE0 403 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 ZNF713Q8N859 430 aaPredicted RBP3.79□□□□□ -1.8
PRKDC-205ENST00000535375 CCDC197Q8NCU1 140 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 ICA1LQ8NDH6 482 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 PTP4A1Q93096 173 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 ZBED6CLQ96FA7 236 aaPredicted RBP3.79□□□□□ -1.8
PRKDC-205ENST00000535375 DPEP3Q9H4B8 488 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 COPS7BQ9H9Q2 264 aaPredicted RBP3.79□□□□□ -1.8
PRKDC-205ENST00000535375 RSPH14Q9UHP6 348 aa3.79□□□□□ -1.8
PRKDC-205ENST00000535375 A0A1W2PQ72 361 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 A4D1N5 150 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 KIAA0513O60268 411 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 DUSP11O75319 330 aaKnown RBP3.78□□□□□ -1.8
PRKDC-205ENST00000535375 RHBDL1O75783 438 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 LY6G6DO95868 133 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 C8orf89P0DMQ9 161 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 ODC1P11926 461 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 CALML3P27482 149 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 ARHGAP1Q07960 439 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 SLMAPQ14BN4 828 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 ABRAXAS1Q6UWZ7 409 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 ZNF600Q6ZNG1 722 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 CYP4V2Q6ZWL3 525 aaPredicted RBP3.78□□□□□ -1.8
PRKDC-205ENST00000535375 CCDC71Q8IV32 467 aaPredicted RBP3.78□□□□□ -1.8
PRKDC-205ENST00000535375 TUSC5Q8IXB3 177 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 ABCA7Q8IZY2 2146 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 Q8N7P7 452 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 SPATA18Q8TC71 538 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 ESAMQ96AP7 390 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 ULK4Q96C45 1275 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 C16orf58Q96GQ5 468 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 CDKN2AIPNLQ96HQ2 116 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 MCCC1Q96RQ3 725 aaPredicted RBP3.78□□□□□ -1.8
PRKDC-205ENST00000535375 ZNF559Q9BR84 538 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 TUFT1Q9NNX1 390 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 SEPT10Q9P0V9 454 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 ZNF256Q9Y2P7 627 aaPredicted RBP3.78□□□□□ -1.8
PRKDC-205ENST00000535375 KIF25-AS1Q9Y6Z4 181 aa3.78□□□□□ -1.8
PRKDC-205ENST00000535375 ZNF646O15015 1829 aaPredicted RBP3.77□□□□□ -1.81
PRKDC-205ENST00000535375 ACEP12821 1306 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 A0A0U1RQK1 487 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 ZNF320A2RRD8 509 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 GTPBP10A4D1E9 387 aaKnown RBP3.77□□□□□ -1.81
PRKDC-205ENST00000535375 MCF2LO15068 1137 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 CHUKO15111 745 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 FMO6PO60774 539 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 PDGFBP01127 241 aaPredicted RBP3.77□□□□□ -1.81
PRKDC-205ENST00000535375 CCR4P51679 360 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 SLC17A1Q14916 467 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 EMC2Q15006 297 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 SPHARQ15513 63 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 NHSL2Q5HYW2 709 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 LINC00696Q6ZRV3 163 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 OTOAQ7RTW8 1153 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 IQCA1Q86XH1 822 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 HSCBQ8IWL3 235 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 AQP12AQ8IXF9 295 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 KLHDC8AQ8IYD2 350 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 THEM5Q8N1Q8 247 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 GPATCH11Q8N954 259 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 ATAD1Q8NBU5 361 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 PRCCQ92733 491 aaPredicted RBP3.77□□□□□ -1.81
PRKDC-205ENST00000535375 PPP1R16AQ96I34 528 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 B3GALT6Q96L58 329 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 ZIM3Q96PE6 472 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 ABCB10Q9NRK6 738 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 ABCC13Q9NSE7 274 aa3.77□□□□□ -1.81
PRKDC-205ENST00000535375 LEF1Q9UJU2 399 aaPredicted RBP3.77□□□□□ -1.81
PRKDC-205ENST00000535375 A0A087X0K7 114 aa3.76□□□□□ -1.81
PRKDC-205ENST00000535375 SRRM4A7MD48 611 aaKnown RBP3.76□□□□□ -1.81
PRKDC-205ENST00000535375 RNF212BA8MTL3 300 aa3.76□□□□□ -1.81
PRKDC-205ENST00000535375 E2F3O00716 465 aa3.76□□□□□ -1.81
PRKDC-205ENST00000535375 GOSR1O95249 250 aa3.76□□□□□ -1.81
PRKDC-205ENST00000535375 GH1P01241 217 aa3.76□□□□□ -1.81
PRKDC-205ENST00000535375 FRKP42685 505 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms