RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 RHBDF1Q96CC6 855 aa13.74□□□□□ -0.21
CTSB-230ENST00000534149 F2RL3Q96RI0 385 aa13.74□□□□□ -0.21
CTSB-230ENST00000534149 MAPKAP1Q9BPZ7 522 aa13.74□□□□□ -0.21
CTSB-230ENST00000534149 NT5DC2Q9H857 520 aa13.74□□□□□ -0.21
CTSB-230ENST00000534149 PLEKHF2Q9H8W4 249 aa13.74□□□□□ -0.21
CTSB-230ENST00000534149 PLAC1Q9HBJ0 212 aa13.74□□□□□ -0.21
CTSB-230ENST00000534149 PROK2Q9HC23 129 aa13.74□□□□□ -0.21
CTSB-230ENST00000534149 ACKR4Q9NPB9 350 aa13.74□□□□□ -0.21
CTSB-230ENST00000534149 PRDM7Q9NQW5 492 aa13.74□□□□□ -0.21
CTSB-230ENST00000534149 C15orf38-AP3S2A0A0A6YYH1 394 aa13.73□□□□□ -0.21
CTSB-230ENST00000534149 NCF1BA6NI72 391 aaPredicted RBP13.73□□□□□ -0.21
CTSB-230ENST00000534149 NCF1CA8MVU1 366 aaPredicted RBP13.73□□□□□ -0.21
CTSB-230ENST00000534149 PRAMEF4O60810 478 aa13.73□□□□□ -0.21
CTSB-230ENST00000534149 EPPINO95925 133 aa13.73□□□□□ -0.21
CTSB-230ENST00000534149 EPXP11678 715 aa13.73□□□□□ -0.21
CTSB-230ENST00000534149 NCF1P14598 390 aaPredicted RBP13.73□□□□□ -0.21
CTSB-230ENST00000534149 CDC25BP30305 580 aa13.73□□□□□ -0.21
CTSB-230ENST00000534149 HPDP32754 393 aaPredicted RBP13.73□□□□□ -0.21
CTSB-230ENST00000534149 ZNF136P52737 540 aa13.73□□□□□ -0.21
CTSB-230ENST00000534149 DCAF7P61962 342 aa13.73□□□□□ -0.21
CTSB-230ENST00000534149 CYP1B1Q16678 543 aa13.73□□□□□ -0.21
CTSB-230ENST00000534149 HP1BP3Q5SSJ5 553 aaPredicted RBP13.73□□□□□ -0.21
CTSB-230ENST00000534149 PRAMEF9Q5VWM5 478 aa13.73□□□□□ -0.21
CTSB-230ENST00000534149 TRMT10BQ6PF06 316 aaKnown RBP13.73□□□□□ -0.21
CTSB-230ENST00000534149 MAATS1Q7Z4T9 603 aa13.73□□□□□ -0.21
CTSB-230ENST00000534149 RASGEF1CQ8N431 466 aa13.73□□□□□ -0.21
CTSB-230ENST00000534149 NKAPQ8N5F7 415 aaKnown RBP13.73□□□□□ -0.21
CTSB-230ENST00000534149 FAM13CQ8NE31 585 aa13.73□□□□□ -0.21
CTSB-230ENST00000534149 OR10G3Q8NGC4 313 aa13.73□□□□□ -0.21
CTSB-230ENST00000534149 NUBPLQ8TB37 319 aa13.73□□□□□ -0.21
CTSB-230ENST00000534149 ANKRD9Q96BM1 317 aaPredicted RBP13.73□□□□□ -0.21
CTSB-230ENST00000534149 SPACA9Q96E40 222 aaPredicted RBP13.73□□□□□ -0.21
CTSB-230ENST00000534149 CFAP36Q96G28 342 aa13.73□□□□□ -0.21
CTSB-230ENST00000534149 SENP5Q96HI0 755 aaPredicted RBP13.73□□□□□ -0.21
CTSB-230ENST00000534149 LYRM4Q9HD34 91 aa13.73□□□□□ -0.21
CTSB-230ENST00000534149 NEUROD4Q9HD90 331 aa13.73□□□□□ -0.21
CTSB-230ENST00000534149 QPCTLQ9NXS2 382 aa13.73□□□□□ -0.21
CTSB-230ENST00000534149 FOXD3Q9UJU5 478 aaPredicted RBP13.73□□□□□ -0.21
CTSB-230ENST00000534149 ZNF490Q9ULM2 529 aaPredicted RBP13.73□□□□□ -0.21
CTSB-230ENST00000534149 DOCK7Q96N67 2140 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 AHRRA9YTQ3 701 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 HRKO00198 91 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 RTCAO00442 366 aaKnown RBP13.72□□□□□ -0.21
CTSB-230ENST00000534149 FGF17O60258 216 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 IL2RAP01589 272 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 COX7A2P14406 83 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 GDF1P27539 372 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 TIMP3P35625 211 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 KCNC1P48547 511 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 AGFG1P52594 562 aaKnown RBP13.72□□□□□ -0.21
CTSB-230ENST00000534149 TGM3Q08188 693 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 CRYZQ08257 329 aaKnown RBP13.72□□□□□ -0.21
CTSB-230ENST00000534149 DUSP8Q13202 625 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 POU4F3Q15319 338 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 PCBP2Q15366 365 aaKnown RBP eCLIP13.72□□□□□ -0.21
CTSB-230ENST00000534149 FBXO48Q5FWF7 155 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 DGAT2L6Q6ZPD8 337 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 UBE3DQ7Z6J8 389 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 ADAMTSL2Q86TH1 951 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 LACC1Q8IV20 430 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 OR4N5Q8IXE1 308 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 DOK4Q8TEW6 326 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 ANKRD49Q8WVL7 239 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 ANKRD7Q92527 254 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 ARSGQ96EG1 525 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 DGAT2Q96PD7 388 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 KCNC2Q96PR1 638 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 TMEM79Q9BSE2 394 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 NAT9Q9BTE0 207 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 DOHHQ9BU89 302 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 PITHD1Q9GZP4 211 aaPredicted RBP13.72□□□□□ -0.21
CTSB-230ENST00000534149 EPB41L4BQ9H329 900 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 CTNNAL1Q9UBT7 734 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 ZNF629Q9UEG4 869 aaPredicted RBP13.72□□□□□ -0.21
CTSB-230ENST00000534149 PSAT1Q9Y617 370 aa13.72□□□□□ -0.21
CTSB-230ENST00000534149 CHCHD2Q9Y6H1 151 aaPredicted RBP13.72□□□□□ -0.21
CTSB-230ENST00000534149 TLN2Q9Y4G6 2542 aa13.71□□□□□ -0.21
CTSB-230ENST00000534149 CLCA1A8K7I4 914 aa13.71□□□□□ -0.21
CTSB-230ENST00000534149 EEF1E1-BLOC1S5C9J1V9 151 aa13.71□□□□□ -0.21
CTSB-230ENST00000534149 CLGNO14967 610 aa13.71□□□□□ -0.21
CTSB-230ENST00000534149 EEF1E1O43324 174 aaKnown RBP13.71□□□□□ -0.21
CTSB-230ENST00000534149 IGKV3-11P04433 115 aa13.71□□□□□ -0.21
CTSB-230ENST00000534149 HEXAP06865 529 aa13.71□□□□□ -0.21
CTSB-230ENST00000534149 CD53P19397 219 aa13.71□□□□□ -0.21
CTSB-230ENST00000534149 CD22P20273 847 aa13.71□□□□□ -0.21
CTSB-230ENST00000534149 ATP5A1P25705 553 aaKnown RBP13.71□□□□□ -0.21
CTSB-230ENST00000534149 STT3AP46977 705 aa13.71□□□□□ -0.21
CTSB-230ENST00000534149 TBL3Q12788 808 aaKnown RBP13.71□□□□□ -0.21
CTSB-230ENST00000534149 DOC2AQ14183 400 aa13.71□□□□□ -0.21
CTSB-230ENST00000534149 ZNF662Q6ZS27 426 aa13.71□□□□□ -0.21
CTSB-230ENST00000534149 KIF18BQ86Y91 864 aa13.71□□□□□ -0.21
CTSB-230ENST00000534149 ACOT4Q8N9L9 421 aa13.71□□□□□ -0.21
CTSB-230ENST00000534149 PPWD1Q96BP3 646 aaKnown RBP13.71□□□□□ -0.21
CTSB-230ENST00000534149 GAL3ST4Q96RP7 486 aa13.71□□□□□ -0.21
CTSB-230ENST00000534149 TIMP4Q99727 224 aa13.71□□□□□ -0.21
CTSB-230ENST00000534149 YIPF4Q9BSR8 244 aa13.71□□□□□ -0.21
CTSB-230ENST00000534149 CAPS2Q9BXY5 557 aa13.71□□□□□ -0.21
CTSB-230ENST00000534149 EHD1Q9H4M9 534 aa13.71□□□□□ -0.21
CTSB-230ENST00000534149 ZNF395Q9H8N7 513 aaPredicted RBP13.71□□□□□ -0.21
CTSB-230ENST00000534149 DNAJC11Q9NVH1 559 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms