RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 AARS2Q5JTZ9 985 aaKnown RBP7.8□□□□□ -1.16
NEDD8-207ENST00000533242 LDLRAP1Q5SW96 308 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 GPRC6AQ5T6X5 926 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 PRAMEF17Q5VTA0 474 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 FAM69BQ5VUD6 431 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 IRAK1BP1Q5VVH5 260 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 Q6ZS92 163 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 MRGPREQ86SM8 312 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 OFCC1Q8IZS5 231 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 KRTCAP2Q8N6L1 136 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 RASGEF1AQ8N9B8 481 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 TRPV3Q8NET8 790 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 OR1L3Q8NH93 324 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 MPP4Q96JB8 637 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 C1GALT1Q9NS00 363 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 DDX18Q9NVP1 670 aaKnown RBP7.8□□□□□ -1.16
NEDD8-207ENST00000533242 ZIM2Q9NZV7 527 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 HACD3Q9P035 362 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 NTNG1Q9Y2I2 539 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 CCDC160A6NGH7 325 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 SLC9B1P1A6NJY1 282 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 TMEM150CB9EJG8 249 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 UPK1AO00322 258 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 PRF1P14222 555 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 CDH2P19022 906 aaPredicted RBP7.8□□□□□ -1.16
NEDD8-207ENST00000533242 CYP2A7P20853 494 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 AGXTP21549 392 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 CDH3P22223 829 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 FASP25445 335 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 NDUFS1P28331 727 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 OTX2P32243 289 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 SOX8P57073 446 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 RPL38P63173 70 aaKnown RBP7.8□□□□□ -1.16
NEDD8-207ENST00000533242 EMX2Q04743 252 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 ILF2Q12905 390 aaKnown RBP7.8□□□□□ -1.16
NEDD8-207ENST00000533242 PRKG2Q13237 762 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 SSPNQ14714 243 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 FXNQ16595 210 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 SGO1Q5FBB7 561 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 INTS11Q5TA45 600 aaKnown RBP7.8□□□□□ -1.16
NEDD8-207ENST00000533242 ZDHHC20Q5W0Z9 365 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 METRNLQ641Q3 311 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 ANKRD34AQ69YU3 496 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 SUSD1Q6UWL2 747 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 DNAJC14Q6Y2X3 702 aaPredicted RBP7.8□□□□□ -1.16
NEDD8-207ENST00000533242 SNX20Q7Z614 316 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 ADAMTSL2Q86TH1 951 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 MSRB3Q8IXL7 192 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 SLC22A15Q8IZD6 547 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 GALNT16Q8N428 558 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 CLHC1Q8NHS4 586 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 TSPEARQ8WU66 669 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 RHBDF1Q96CC6 855 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 CENPNQ96H22 339 aaPredicted RBP7.8□□□□□ -1.16
NEDD8-207ENST00000533242 INSM2Q96T92 566 aaPredicted RBP7.8□□□□□ -1.16
NEDD8-207ENST00000533242 C17orf62Q9BQA9 187 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 ADI1Q9BV57 179 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 KIR3DX1Q9H7L2 352 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 NTN4Q9HB63 628 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 IMP3Q9NV31 184 aaKnown RBP7.8□□□□□ -1.16
NEDD8-207ENST00000533242 POMT2Q9UKY4 750 aa7.8□□□□□ -1.16
NEDD8-207ENST00000533242 RP1L1Q8IWN7 2480 aaPredicted RBP7.8□□□□□ -1.16
NEDD8-207ENST00000533242 FER1L5A0AVI2 2057 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 GLYATL1P3A0A0U1RQE8 302 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 PEX12O00623 359 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 SEC24DO94855 1032 aaPredicted RBP7.79□□□□□ -1.16
NEDD8-207ENST00000533242 SNAP29O95721 258 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 CD63P08962 238 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 ENO2P09104 434 aaPredicted RBP7.79□□□□□ -1.16
NEDD8-207ENST00000533242 PCNAP12004 261 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 GRNP28799 593 aaKnown RBP7.79□□□□□ -1.16
NEDD8-207ENST00000533242 ALDH3B2P48448 385 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 CTSCP53634 463 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 IST1P53990 364 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 PHC1P78364 1004 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 MERTKQ12866 999 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 NFE2L1Q14494 772 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 PTCHD3Q3KNS1 767 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 DCAF10Q5QP82 559 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 ZNF385CQ66K41 422 aaPredicted RBP7.79□□□□□ -1.16
NEDD8-207ENST00000533242 SP5Q6BEB4 398 aaPredicted RBP7.79□□□□□ -1.16
NEDD8-207ENST00000533242 KRT80Q6KB66 452 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 TMEM220Q6QAJ8 160 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 MILR1Q7Z6M3 343 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 VRK3Q8IV63 474 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 DPP10Q8N608 796 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 BEND7Q8N7W2 519 aaPredicted RBP7.79□□□□□ -1.16
NEDD8-207ENST00000533242 PAPD5Q8NDF8 572 aaKnown RBP7.79□□□□□ -1.16
NEDD8-207ENST00000533242 DDHD1Q8NEL9 900 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 MTFMTQ96DP5 389 aaKnown RBP7.79□□□□□ -1.16
NEDD8-207ENST00000533242 CGREF1Q99674 301 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 CCT7Q99832 543 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 EGFL8Q99944 293 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 ZNF552Q9H707 407 aaPredicted RBP7.79□□□□□ -1.16
NEDD8-207ENST00000533242 RIC8BQ9NVN3 520 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 SLC25A37Q9NYZ2 338 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 SERTAD3Q9UJW9 196 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 ACSL5Q9ULC5 683 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 OARD1Q9Y530 152 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 COMMD10Q9Y6G5 202 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms