RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 FOLH1Q04609 750 aa28.17■■■□□ 2.1
SSSCA1-207ENST00000533115 PNPLA5Q7Z6Z6 429 aaPredicted RBP28.17■■■□□ 2.1
SSSCA1-207ENST00000533115 ZNF321PQ8N8H1 164 aa28.17■■■□□ 2.1
SSSCA1-207ENST00000533115 FRMD6Q96NE9 622 aa28.17■■■□□ 2.1
SSSCA1-207ENST00000533115 DGAT2Q96PD7 388 aa28.17■■■□□ 2.1
SSSCA1-207ENST00000533115 DLX3O60479 287 aa28.16■■■□□ 2.1
SSSCA1-207ENST00000533115 GSTA1P08263 222 aa28.16■■■□□ 2.1
SSSCA1-207ENST00000533115 HSD17B3P37058 310 aa28.16■■■□□ 2.1
SSSCA1-207ENST00000533115 SSR4P51571 173 aa28.16■■■□□ 2.1
SSSCA1-207ENST00000533115 ZNF678Q5SXM1 525 aa28.16■■■□□ 2.1
SSSCA1-207ENST00000533115 LETMD1Q6P1Q0 360 aa28.16■■■□□ 2.1
SSSCA1-207ENST00000533115 MYRIPQ8NFW9 859 aa28.16■■■□□ 2.1
SSSCA1-207ENST00000533115 TRPC4APQ8TEL6 797 aa28.16■■■□□ 2.1
SSSCA1-207ENST00000533115 UBLCP1Q8WVY7 318 aaPredicted RBP28.16■■■□□ 2.1
SSSCA1-207ENST00000533115 LIN28AQ9H9Z2 209 aaKnown RBP28.16■■■□□ 2.1
SSSCA1-207ENST00000533115 MYOTQ9UBF9 498 aa28.16■■■□□ 2.1
SSSCA1-207ENST00000533115 A0A1W2PR48 441 aa28.15■■■□□ 2.1
SSSCA1-207ENST00000533115 CYSRT1A8MQ03 144 aa28.15■■■□□ 2.1
SSSCA1-207ENST00000533115 GBAP04062 536 aa28.15■■■□□ 2.1
SSSCA1-207ENST00000533115 NR2F6P10588 404 aa28.15■■■□□ 2.1
SSSCA1-207ENST00000533115 ATP5F1P24539 256 aaPredicted RBP28.15■■■□□ 2.1
SSSCA1-207ENST00000533115 ALDH6A1Q02252 535 aaKnown RBP28.15■■■□□ 2.1
SSSCA1-207ENST00000533115 CLCQ05315 142 aa28.15■■■□□ 2.1
SSSCA1-207ENST00000533115 UNC50Q53HI1 259 aa28.15■■■□□ 2.1
SSSCA1-207ENST00000533115 SGO1Q5FBB7 561 aa28.15■■■□□ 2.1
SSSCA1-207ENST00000533115 C16orf47Q6ZP98 133 aaPredicted RBP28.15■■■□□ 2.1
SSSCA1-207ENST00000533115 CYP4Z2PQ8N1L4 340 aa28.15■■■□□ 2.1
SSSCA1-207ENST00000533115 OR8K3Q8NH51 312 aa28.15■■■□□ 2.1
SSSCA1-207ENST00000533115 RBM18Q96H35 190 aaKnown RBP28.15■■■□□ 2.1
SSSCA1-207ENST00000533115 WDR41Q9HAD4 459 aa28.15■■■□□ 2.1
SSSCA1-207ENST00000533115 AHSPQ9NZD4 102 aa28.15■■■□□ 2.1
SSSCA1-207ENST00000533115 COPS7AQ9UBW8 275 aa28.15■■■□□ 2.1
SSSCA1-207ENST00000533115 PLEKHB1Q9UF11 243 aaPredicted RBP28.15■■■□□ 2.1
SSSCA1-207ENST00000533115 TRPS1Q9UHF7 1281 aa28.15■■■□□ 2.1
SSSCA1-207ENST00000533115 ZNF225Q9UK10 706 aa28.15■■■□□ 2.1
SSSCA1-207ENST00000533115 OR2J2O76002 312 aa28.14■■■□□ 2.1
SSSCA1-207ENST00000533115 WISP2O76076 250 aa28.14■■■□□ 2.1
SSSCA1-207ENST00000533115 SUPT7LO94864 414 aa28.14■■■□□ 2.1
SSSCA1-207ENST00000533115 SHBGP04278 402 aa28.14■■■□□ 2.1
SSSCA1-207ENST00000533115 PLIN5Q00G26 463 aa28.14■■■□□ 2.1
SSSCA1-207ENST00000533115 ZNF721Q8TF20 911 aa28.14■■■□□ 2.1
SSSCA1-207ENST00000533115 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP28.14■■■□□ 2.1
SSSCA1-207ENST00000533115 PPWD1Q96BP3 646 aaKnown RBP28.14■■■□□ 2.1
SSSCA1-207ENST00000533115 TMEM237Q96Q45 408 aa28.14■■■□□ 2.1
SSSCA1-207ENST00000533115 FARSBQ9NSD9 589 aaKnown RBP28.14■■■□□ 2.1
SSSCA1-207ENST00000533115 DCDC2Q9UHG0 476 aa28.14■■■□□ 2.1
SSSCA1-207ENST00000533115 SNX6Q9UNH7 406 aa28.14■■■□□ 2.1
SSSCA1-207ENST00000533115 KLF13Q9Y2Y9 288 aaPredicted RBP28.14■■■□□ 2.1
SSSCA1-207ENST00000533115 A0A1B0GUH1 482 aa28.13■■■□□ 2.09
SSSCA1-207ENST00000533115 A0A1W2PPM1 405 aa28.13■■■□□ 2.09
SSSCA1-207ENST00000533115 GLOD5A6NK44 160 aa28.13■■■□□ 2.09
SSSCA1-207ENST00000533115 GPR75O95800 540 aa28.13■■■□□ 2.09
SSSCA1-207ENST00000533115 MLYCDO95822 493 aa28.13■■■□□ 2.09
SSSCA1-207ENST00000533115 AIFM1O95831 613 aa28.13■■■□□ 2.09
SSSCA1-207ENST00000533115 PDYNP01213 254 aa28.13■■■□□ 2.09
SSSCA1-207ENST00000533115 ALOX15P16050 662 aaPredicted RBP28.13■■■□□ 2.09
SSSCA1-207ENST00000533115 IMPDH1P20839 514 aa28.13■■■□□ 2.09
SSSCA1-207ENST00000533115 RNF4P78317 190 aa28.13■■■□□ 2.09
SSSCA1-207ENST00000533115 SLC22A9Q8IVM8 553 aa28.13■■■□□ 2.09
SSSCA1-207ENST00000533115 SELENOMQ8WWX9 145 aa28.13■■■□□ 2.09
SSSCA1-207ENST00000533115 SREK1Q8WXA9 508 aaKnown RBP28.13■■■□□ 2.09
SSSCA1-207ENST00000533115 SENP5Q96HI0 755 aaPredicted RBP28.13■■■□□ 2.09
SSSCA1-207ENST00000533115 MRPL1Q9BYD6 325 aaKnown RBP28.13■■■□□ 2.09
SSSCA1-207ENST00000533115 ADAM29Q9UKF5 820 aa28.13■■■□□ 2.09
SSSCA1-207ENST00000533115 WASHC1A8K0Z3 465 aa28.12■■■□□ 2.09
SSSCA1-207ENST00000533115 WWP2O00308 870 aa28.12■■■□□ 2.09
SSSCA1-207ENST00000533115 DYRK3O43781 588 aa28.12■■■□□ 2.09
SSSCA1-207ENST00000533115 OR4F21O95013 312 aa28.12■■■□□ 2.09
SSSCA1-207ENST00000533115 KLK1P06870 262 aa28.12■■■□□ 2.09
SSSCA1-207ENST00000533115 HK2P52789 917 aa28.12■■■□□ 2.09
SSSCA1-207ENST00000533115 PRKAA2P54646 552 aa28.12■■■□□ 2.09
SSSCA1-207ENST00000533115 C1QL3Q5VWW1 255 aa28.12■■■□□ 2.09
SSSCA1-207ENST00000533115 DGAT2L6Q6ZPD8 337 aa28.12■■■□□ 2.09
SSSCA1-207ENST00000533115 PAGE2Q7Z2X7 111 aa28.12■■■□□ 2.09
SSSCA1-207ENST00000533115 GPALPP1Q8IXQ4 340 aa28.12■■■□□ 2.09
SSSCA1-207ENST00000533115 ST13P4Q8IZP2 240 aaPredicted RBP28.12■■■□□ 2.09
SSSCA1-207ENST00000533115 METTL4Q8N3J2 472 aa28.12■■■□□ 2.09
SSSCA1-207ENST00000533115 CPSF7Q8N684 471 aaKnown RBP28.12■■■□□ 2.09
SSSCA1-207ENST00000533115 OR5L2Q8NGL0 311 aa28.12■■■□□ 2.09
SSSCA1-207ENST00000533115 ASB15Q8WXK1 588 aa28.12■■■□□ 2.09
SSSCA1-207ENST00000533115 GPR137Q96N19 417 aa28.12■■■□□ 2.09
SSSCA1-207ENST00000533115 RASL10BQ96S79 203 aa28.12■■■□□ 2.09
SSSCA1-207ENST00000533115 PELOQ9BRX2 385 aaKnown RBP28.12■■■□□ 2.09
SSSCA1-207ENST00000533115 PPCSQ9HAB8 311 aa28.12■■■□□ 2.09
SSSCA1-207ENST00000533115 BRF2Q9HAW0 419 aa28.12■■■□□ 2.09
SSSCA1-207ENST00000533115 SLC12A4Q9UP95 1085 aa28.12■■■□□ 2.09
SSSCA1-207ENST00000533115 A1L4Q6 167 aa28.11■■■□□ 2.09
SSSCA1-207ENST00000533115 PER3P56645 1201 aa28.11■■■□□ 2.09
SSSCA1-207ENST00000533115 RBPJQ06330 500 aa28.11■■■□□ 2.09
SSSCA1-207ENST00000533115 KRTCAP3Q53RY4 240 aa28.11■■■□□ 2.09
SSSCA1-207ENST00000533115 MDGA2Q7Z553 956 aa28.11■■■□□ 2.09
SSSCA1-207ENST00000533115 FJX1Q86VR8 437 aa28.11■■■□□ 2.09
SSSCA1-207ENST00000533115 UCN3Q969E3 161 aa28.11■■■□□ 2.09
SSSCA1-207ENST00000533115 ZNF382Q96SR6 550 aa28.11■■■□□ 2.09
SSSCA1-207ENST00000533115 TSPAN10Q9H1Z9 355 aaPredicted RBP28.11■■■□□ 2.09
SSSCA1-207ENST00000533115 ERVK-11Q9UQG0 969 aa28.11■■■□□ 2.09
SSSCA1-207ENST00000533115 ARHGAP10A1A4S6 786 aa28.1■■■□□ 2.09
SSSCA1-207ENST00000533115 A8MVJ9 347 aa28.1■■■□□ 2.09
SSSCA1-207ENST00000533115 FOXO6A8MYZ6 492 aa28.1■■■□□ 2.09
SSSCA1-207ENST00000533115 NPIPA5E9PKD4 350 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms