RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 ZNF517Q6ZMY9 492 aaPredicted RBP13.92□□□□□ -0.18
NXF1-214ENST00000533048 RINLQ6ZS11 566 aa13.92□□□□□ -0.18
NXF1-214ENST00000533048 SCUBE1Q8IWY4 988 aa13.92□□□□□ -0.18
NXF1-214ENST00000533048 PGAM4Q8N0Y7 254 aa13.92□□□□□ -0.18
NXF1-214ENST00000533048 SHISA5Q8N114 240 aa13.92□□□□□ -0.18
NXF1-214ENST00000533048 METTL27Q8N6F8 245 aaPredicted RBP13.92□□□□□ -0.18
NXF1-214ENST00000533048 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.92□□□□□ -0.18
NXF1-214ENST00000533048 PMEPA1Q969W9 287 aa13.92□□□□□ -0.18
NXF1-214ENST00000533048 CIDECQ96AQ7 238 aaPredicted RBP13.92□□□□□ -0.18
NXF1-214ENST00000533048 FKBP10Q96AY3 582 aa13.92□□□□□ -0.18
NXF1-214ENST00000533048 KLHL29Q96CT2 875 aa13.92□□□□□ -0.18
NXF1-214ENST00000533048 CNRIP1Q96F85 164 aaPredicted RBP13.92□□□□□ -0.18
NXF1-214ENST00000533048 ZBED6CLQ96FA7 236 aaPredicted RBP13.92□□□□□ -0.18
NXF1-214ENST00000533048 PHF12Q96QT6 1004 aa13.92□□□□□ -0.18
NXF1-214ENST00000533048 CTRCQ99895 268 aa13.92□□□□□ -0.18
NXF1-214ENST00000533048 GPATCH1Q9BRR8 931 aaKnown RBP13.92□□□□□ -0.18
NXF1-214ENST00000533048 BTBD10Q9BSF8 475 aa13.92□□□□□ -0.18
NXF1-214ENST00000533048 TGIF2Q9GZN2 237 aa13.92□□□□□ -0.18
NXF1-214ENST00000533048 SLC26A1Q9H2B4 701 aa13.92□□□□□ -0.18
NXF1-214ENST00000533048 MKKSQ9NPJ1 570 aaPredicted RBP13.92□□□□□ -0.18
NXF1-214ENST00000533048 LANCL2Q9NS86 450 aa13.92□□□□□ -0.18
NXF1-214ENST00000533048 SLC22A11Q9NSA0 550 aa13.92□□□□□ -0.18
NXF1-214ENST00000533048 C5AR2Q9P296 337 aa13.92□□□□□ -0.18
NXF1-214ENST00000533048 NDOR1Q9UHB4 597 aa13.92□□□□□ -0.18
NXF1-214ENST00000533048 ERVK-11Q9UQG0 969 aa13.92□□□□□ -0.18
NXF1-214ENST00000533048 MAU2Q9Y6X3 613 aa13.92□□□□□ -0.18
NXF1-214ENST00000533048 FAM227AF5H4B4 570 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 KCNH1O95259 989 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 FHP07954 510 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 IFI6P09912 130 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 JMJD7P0C870 316 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 SDHBP21912 280 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 NTSP30990 170 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 HSD17B7P56937 341 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 DCDP81605 110 aaKnown RBP13.91□□□□□ -0.18
NXF1-214ENST00000533048 ART3Q13508 389 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 NFYCQ13952 458 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 NKAIN1Q4KMZ8 207 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 DNAL1Q4LDG9 190 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 ARHGAP40Q5TG30 622 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 DHDDSQ86SQ9 333 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 ZC3H7AQ8IWR0 971 aaKnown RBP13.91□□□□□ -0.18
NXF1-214ENST00000533048 CLECL1Q8IZS7 167 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 OR4K14Q8NGD5 310 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 SUN3Q8TAQ9 357 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 OR5P2Q8WZ92 322 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 EXOSC8Q96B26 276 aaKnown RBP13.91□□□□□ -0.18
NXF1-214ENST00000533048 ANKRD9Q96BM1 317 aaPredicted RBP13.91□□□□□ -0.18
NXF1-214ENST00000533048 MIEF2Q96C03 454 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 LRRC58Q96CX6 371 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 CLIP3Q96DZ5 547 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 PEX11GQ96HA9 241 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 AMDHD1Q96NU7 426 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 SPRY4Q9C004 299 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 TRIM4Q9C037 500 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 SLC7A5P2Q9GIP4 190 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 PAIP1Q9H074 479 aaKnown RBP13.91□□□□□ -0.18
NXF1-214ENST00000533048 NEUROD4Q9HD90 331 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 GIMAP4Q9NUV9 329 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.91□□□□□ -0.18
NXF1-214ENST00000533048 GID8Q9NWU2 228 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 MMACHCQ9Y4U1 282 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 PCDHGA8Q9Y5G5 932 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 CLDN16Q9Y5I7 305 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 B3GALT1Q9Y5Z6 326 aa13.91□□□□□ -0.18
NXF1-214ENST00000533048 C15orf38-AP3S2A0A0A6YYH1 394 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 A0A1W2PRB8 838 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 PMS2P1A4D2B8 440 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 WASHC1A8K0Z3 465 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 AGRPO00253 132 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 MEN1O00255 615 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 CLDN4O14493 209 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 RFXANKO14593 260 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 FGF17O60258 216 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 CTNSO60931 367 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 BMP10O95393 424 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 GPR75O95800 540 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 DLGAP3O95886 979 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 NTRK1P04629 796 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 CYC1P08574 325 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 ZNF28P17035 718 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 CSNK2A2P19784 350 aaPredicted RBP13.9□□□□□ -0.18
NXF1-214ENST00000533048 HBA1P69905 142 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 FOLH1Q04609 750 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 TARDBPQ13148 414 aaKnown RBP eCLIP13.9□□□□□ -0.18
NXF1-214ENST00000533048 COL9A2Q14055 689 aaPredicted RBP13.9□□□□□ -0.18
NXF1-214ENST00000533048 C1orf189Q5VU69 101 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 C16orf89Q6UX73 402 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 QSOX2Q6ZRP7 698 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 ZNF771Q7L3S4 317 aaPredicted RBP13.9□□□□□ -0.18
NXF1-214ENST00000533048 ARPINQ7Z6K5 226 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 ANKRD46Q86W74 232 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 MSRB3Q8IXL7 192 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 GALNT15Q8N3T1 639 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 C7orf57Q8NEG2 295 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 ZFP28Q8NHY6 868 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 COL26A1Q96A83 441 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 PANX1Q96RD7 426 aa13.9□□□□□ -0.18
NXF1-214ENST00000533048 HOPXQ9BPY8 73 aaPredicted RBP13.9□□□□□ -0.18
NXF1-214ENST00000533048 INPP5KQ9BT40 448 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms