RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 MS4A12Q9NXJ0 267 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 TSC22D4Q9Y3Q8 395 aa15.58■□□□□ 0.08
CPSF1-207ENST00000531727 G3V3Y1 287 aa15.57■□□□□ 0.08
CPSF1-207ENST00000531727 PLPP1O14494 284 aa15.57■□□□□ 0.08
CPSF1-207ENST00000531727 GLSO94925 669 aaPredicted RBP15.57■□□□□ 0.08
CPSF1-207ENST00000531727 C2P06681 752 aa15.57■□□□□ 0.08
CPSF1-207ENST00000531727 ETF1P62495 437 aaKnown RBP15.57■□□□□ 0.08
CPSF1-207ENST00000531727 TNFRSF17Q02223 184 aa15.57■□□□□ 0.08
CPSF1-207ENST00000531727 BIKQ13323 160 aa15.57■□□□□ 0.08
CPSF1-207ENST00000531727 FAM83EQ2M2I3 478 aa15.57■□□□□ 0.08
CPSF1-207ENST00000531727 MPEG1Q2M385 716 aa15.57■□□□□ 0.08
CPSF1-207ENST00000531727 EMC4Q5J8M3 183 aa15.57■□□□□ 0.08
CPSF1-207ENST00000531727 NDUFAF5Q5TEU4 345 aa15.57■□□□□ 0.08
CPSF1-207ENST00000531727 LIPJQ5W064 366 aa15.57■□□□□ 0.08
CPSF1-207ENST00000531727 ZNF572Q7Z3I7 529 aaPredicted RBP15.57■□□□□ 0.08
CPSF1-207ENST00000531727 GPR180Q86V85 440 aa15.57■□□□□ 0.08
CPSF1-207ENST00000531727 OR4N5Q8IXE1 308 aa15.57■□□□□ 0.08
CPSF1-207ENST00000531727 ZCCHC7Q8N3Z6 543 aaKnown RBP15.57■□□□□ 0.08
CPSF1-207ENST00000531727 ASB5Q8WWX0 329 aa15.57■□□□□ 0.08
CPSF1-207ENST00000531727 TANKQ92844 425 aa15.57■□□□□ 0.08
CPSF1-207ENST00000531727 C14orf79Q96F83 325 aa15.57■□□□□ 0.08
CPSF1-207ENST00000531727 SENP5Q96HI0 755 aaPredicted RBP15.57■□□□□ 0.08
CPSF1-207ENST00000531727 MTERF1Q99551 399 aaKnown RBP15.57■□□□□ 0.08
CPSF1-207ENST00000531727 CENPKQ9BS16 269 aa15.57■□□□□ 0.08
CPSF1-207ENST00000531727 SACM1LQ9NTJ5 587 aa15.57■□□□□ 0.08
CPSF1-207ENST00000531727 PHF11Q9UIL8 331 aa15.57■□□□□ 0.08
CPSF1-207ENST00000531727 ANGPTL3Q9Y5C1 460 aa15.57■□□□□ 0.08
CPSF1-207ENST00000531727 PCDHGA11Q9Y5H2 935 aa15.57■□□□□ 0.08
CPSF1-207ENST00000531727 ADGRG4Q8IZF6 3080 aa15.57■□□□□ 0.08
CPSF1-207ENST00000531727 HMX2A2RU54 273 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 DYRK3O43781 588 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 IGKV3-11P04433 115 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 GFAPP14136 432 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 CHRNB4P30926 498 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 TLX1P31314 330 aaPredicted RBP15.56■□□□□ 0.08
CPSF1-207ENST00000531727 ARFIP1P53367 373 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 ALDH18A1P54886 795 aaKnown RBP15.56■□□□□ 0.08
CPSF1-207ENST00000531727 PLIN5Q00G26 463 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 FOLH1Q04609 750 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 ASPHQ12797 758 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 ACAP2Q15057 778 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 PFKFB4Q16877 469 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 PIGGQ5H8A4 983 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 MROH9Q5TGP6 573 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 SYT10Q6XYQ8 523 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 FAM47EQ6ZV65 393 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 MYLK4Q86YV6 388 aaPredicted RBP15.56■□□□□ 0.08
CPSF1-207ENST00000531727 C9orf40Q8IXQ3 194 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 FAM109AQ8N4B1 249 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 NUBPLQ8TB37 319 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 RBM18Q96H35 190 aaKnown RBP15.56■□□□□ 0.08
CPSF1-207ENST00000531727 ART5Q96L15 291 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 TREX2Q9BQ50 279 aaPredicted RBP15.56■□□□□ 0.08
CPSF1-207ENST00000531727 IL1RL2Q9HB29 575 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 SNX15Q9NRS6 342 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 RNF6Q9Y252 685 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 ATG4BQ9Y4P1 393 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 EML6Q6ZMW3 1958 aa15.56■□□□□ 0.08
CPSF1-207ENST00000531727 OR14I1A6ND48 311 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 NPIPA2E9PIF3 369 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 NPIPA3F8WFD2 350 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 H0YIV9 168 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 KLK8O60259 260 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 UGDHO60701 494 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 IGHG3P01860 377 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 P04436 131 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 CCL3P10147 92 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 PTX3P26022 381 aaPredicted RBP15.55■□□□□ 0.08
CPSF1-207ENST00000531727 BUD31P41223 144 aaPredicted RBP15.55■□□□□ 0.08
CPSF1-207ENST00000531727 HNRNPH2P55795 449 aaKnown RBP15.55■□□□□ 0.08
CPSF1-207ENST00000531727 RPS13P62277 151 aaKnown RBP15.55■□□□□ 0.08
CPSF1-207ENST00000531727 PHEXP78562 749 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 FOXO1Q12778 655 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 PCBP2Q15366 365 aaKnown RBP eCLIP15.55■□□□□ 0.08
CPSF1-207ENST00000531727 HYAL4Q2M3T9 481 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 ZNF791Q3KP31 576 aaPredicted RBP15.55■□□□□ 0.08
CPSF1-207ENST00000531727 C18orf63Q68DL7 685 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 MEX3BQ6ZN04 569 aaKnown RBP15.55■□□□□ 0.08
CPSF1-207ENST00000531727 DGAT2L6Q6ZPD8 337 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 C17orf53Q8N3J3 647 aaPredicted RBP15.55■□□□□ 0.08
CPSF1-207ENST00000531727 RPRMLQ8N4K4 120 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 TMEM251Q8N6I4 163 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 LILRB4Q8NHJ6 448 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 SLC22A8Q8TCC7 542 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 CHTF18Q8WVB6 975 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 RND1Q92730 232 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 PPWD1Q96BP3 646 aaKnown RBP15.55■□□□□ 0.08
CPSF1-207ENST00000531727 REPS1Q96D71 796 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 MRRFQ96E11 262 aaKnown RBP15.55■□□□□ 0.08
CPSF1-207ENST00000531727 FBXL20Q96IG2 436 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 ACTR8Q9H981 624 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 ZDHHC18Q9NUE0 388 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 LYARQ9NX58 379 aaKnown RBP15.55■□□□□ 0.08
CPSF1-207ENST00000531727 LIPGQ9Y5X9 500 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 PKDREJQ9NTG1 2253 aa15.55■□□□□ 0.08
CPSF1-207ENST00000531727 A0A096LPK6 155 aa15.54■□□□□ 0.08
CPSF1-207ENST00000531727 ESYT3A0FGR9 886 aa15.54■□□□□ 0.08
CPSF1-207ENST00000531727 LRRC14BA6NHZ5 514 aa15.54■□□□□ 0.08
CPSF1-207ENST00000531727 HRKO00198 91 aa15.54■□□□□ 0.08
CPSF1-207ENST00000531727 BCKDKO14874 412 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms