RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 GABPB2Q8TAK5 448 aaPredicted RBP11.3□□□□□ -0.6
SRPRA-202ENST00000527817 PIGTQ969N2 578 aa11.3□□□□□ -0.6
SRPRA-202ENST00000527817 ISL2Q96A47 359 aa11.3□□□□□ -0.6
SRPRA-202ENST00000527817 SPACA9Q96E40 222 aaPredicted RBP11.3□□□□□ -0.6
SRPRA-202ENST00000527817 HSPBAP1Q96EW2 488 aa11.3□□□□□ -0.6
SRPRA-202ENST00000527817 SERPINB12Q96P63 405 aa11.3□□□□□ -0.6
SRPRA-202ENST00000527817 PRDM14Q9GZV8 571 aa11.3□□□□□ -0.6
SRPRA-202ENST00000527817 NT5DC2Q9H857 520 aa11.3□□□□□ -0.6
SRPRA-202ENST00000527817 COPS7AQ9UBW8 275 aa11.3□□□□□ -0.6
SRPRA-202ENST00000527817 DOCK7Q96N67 2140 aa11.29□□□□□ -0.6
SRPRA-202ENST00000527817 MBD3L4A6NDZ8 208 aaPredicted RBP11.29□□□□□ -0.6
SRPRA-202ENST00000527817 MBD3L3A6NE82 208 aaPredicted RBP11.29□□□□□ -0.6
SRPRA-202ENST00000527817 MBD3L5A6NJ08 208 aaPredicted RBP11.29□□□□□ -0.6
SRPRA-202ENST00000527817 LRRC3CA6NJW4 275 aa11.29□□□□□ -0.6
SRPRA-202ENST00000527817 SMPD2O60906 423 aa11.29□□□□□ -0.6
SRPRA-202ENST00000527817 TBX6O95947 436 aaPredicted RBP11.29□□□□□ -0.6
SRPRA-202ENST00000527817 GNAZP19086 355 aa11.29□□□□□ -0.6
SRPRA-202ENST00000527817 PTMSP20962 102 aa11.29□□□□□ -0.6
SRPRA-202ENST00000527817 PLA2G16P53816 162 aa11.29□□□□□ -0.6
SRPRA-202ENST00000527817 WNT3P56703 355 aa11.29□□□□□ -0.6
SRPRA-202ENST00000527817 PPP2R2BQ00005 443 aa11.29□□□□□ -0.6
SRPRA-202ENST00000527817 BIKQ13323 160 aa11.29□□□□□ -0.6
SRPRA-202ENST00000527817 PDAP1Q13442 181 aaKnown RBP11.29□□□□□ -0.6
SRPRA-202ENST00000527817 RBM20Q5T481 1227 aaKnown RBP11.29□□□□□ -0.6
SRPRA-202ENST00000527817 VASNQ6EMK4 673 aa11.29□□□□□ -0.6
SRPRA-202ENST00000527817 ABHD17CQ6PCB6 329 aa11.29□□□□□ -0.6
SRPRA-202ENST00000527817 SBSNQ6UWP8 590 aa11.29□□□□□ -0.6
SRPRA-202ENST00000527817 SLCO4C1Q6ZQN7 724 aa11.29□□□□□ -0.6
SRPRA-202ENST00000527817 SYDE1Q6ZW31 735 aaPredicted RBP11.29□□□□□ -0.6
SRPRA-202ENST00000527817 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.29□□□□□ -0.6
SRPRA-202ENST00000527817 AGGF1Q8N302 714 aaeCLIP11.29□□□□□ -0.6
SRPRA-202ENST00000527817 MBD3L2Q8NHZ7 208 aaPredicted RBP11.29□□□□□ -0.6
SRPRA-202ENST00000527817 SLC22A8Q8TCC7 542 aa11.29□□□□□ -0.6
SRPRA-202ENST00000527817 ZNF592Q92610 1267 aa11.29□□□□□ -0.6
SRPRA-202ENST00000527817 SENP5Q96HI0 755 aaPredicted RBP11.29□□□□□ -0.6
SRPRA-202ENST00000527817 CSF3RQ99062 836 aa11.29□□□□□ -0.6
SRPRA-202ENST00000527817 BAG1Q99933 345 aaPredicted RBP11.29□□□□□ -0.6
SRPRA-202ENST00000527817 WDR83Q9BRX9 315 aaKnown RBP11.29□□□□□ -0.6
SRPRA-202ENST00000527817 PITHD1Q9GZP4 211 aaPredicted RBP11.29□□□□□ -0.6
SRPRA-202ENST00000527817 REXO4Q9GZR2 422 aaKnown RBP11.29□□□□□ -0.6
SRPRA-202ENST00000527817 CALHM2Q9HA72 323 aa11.29□□□□□ -0.6
SRPRA-202ENST00000527817 ADAM21Q9UKJ8 722 aa11.29□□□□□ -0.6
SRPRA-202ENST00000527817 CHCHD2Q9Y6H1 151 aaPredicted RBP11.29□□□□□ -0.6
SRPRA-202ENST00000527817 IKBKGQ9Y6K9 419 aa11.29□□□□□ -0.6
SRPRA-202ENST00000527817 C15orf38-AP3S2A0A0A6YYH1 394 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 ANKRD33BA6NCL7 494 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 ANKDD1BA6NHY2 528 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 INAFM1C9JVW0 142 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 LDB3O75112 727 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 TRIM3O75382 744 aaPredicted RBP11.28□□□□□ -0.6
SRPRA-202ENST00000527817 KRT14P02533 472 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 FGGP02679 453 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 IGKV3-11P04433 115 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 CCDC175P0C221 793 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 SERPINB3P29508 390 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 VPS41P49754 854 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 AGFG1P52594 562 aaKnown RBP11.28□□□□□ -0.6
SRPRA-202ENST00000527817 CDKL1Q00532 357 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 POU4F3Q15319 338 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 PPP1R3AQ16821 1122 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 KCTD19Q17RG1 926 aaPredicted RBP11.28□□□□□ -0.6
SRPRA-202ENST00000527817 NHSL2Q5HYW2 709 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 PRAMEF20Q5VT98 475 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 TRIM40Q6P9F5 258 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 GALNT7Q86SF2 657 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 TMEM139Q8IV31 216 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 KRT78Q8N1N4 520 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 CCT6BQ92526 530 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 ANKRD7Q92527 254 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 ANKRD9Q96BM1 317 aaPredicted RBP11.28□□□□□ -0.6
SRPRA-202ENST00000527817 Q96MF0 132 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 RUNDC3BQ96NL0 473 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 DESI2Q9BSY9 194 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 LYRM4Q9HD34 91 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 PRDM7Q9NQW5 492 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 CNOT11Q9UKZ1 510 aaKnown RBP11.28□□□□□ -0.6
SRPRA-202ENST00000527817 VWA7Q9Y334 891 aa11.28□□□□□ -0.6
SRPRA-202ENST00000527817 SH3D21A4FU49 640 aa11.27□□□□□ -0.61
SRPRA-202ENST00000527817 EEF1E1-BLOC1S5C9J1V9 151 aa11.27□□□□□ -0.61
SRPRA-202ENST00000527817 GOLGA8MH3BSY2 632 aa11.27□□□□□ -0.61
SRPRA-202ENST00000527817 CASKO14936 926 aa11.27□□□□□ -0.61
SRPRA-202ENST00000527817 SMAD7O15105 426 aaKnown RBP11.27□□□□□ -0.61
SRPRA-202ENST00000527817 EEF1E1O43324 174 aaKnown RBP11.27□□□□□ -0.61
SRPRA-202ENST00000527817 HPNP05981 417 aa11.27□□□□□ -0.61
SRPRA-202ENST00000527817 FBXO45P0C2W1 286 aa11.27□□□□□ -0.61
SRPRA-202ENST00000527817 GDF1P27539 372 aa11.27□□□□□ -0.61
SRPRA-202ENST00000527817 CERS1P27544 350 aa11.27□□□□□ -0.61
SRPRA-202ENST00000527817 HNMTP50135 292 aa11.27□□□□□ -0.61
SRPRA-202ENST00000527817 TGM3Q08188 693 aa11.27□□□□□ -0.61
SRPRA-202ENST00000527817 SLBPQ14493 270 aaKnown RBP eCLIP11.27□□□□□ -0.61
SRPRA-202ENST00000527817 TBCELQ5QJ74 424 aa11.27□□□□□ -0.61
SRPRA-202ENST00000527817 CNTN4Q8IWV2 1026 aa11.27□□□□□ -0.61
SRPRA-202ENST00000527817 C9orf40Q8IXQ3 194 aa11.27□□□□□ -0.61
SRPRA-202ENST00000527817 FAM13CQ8NE31 585 aa11.27□□□□□ -0.61
SRPRA-202ENST00000527817 NTNG2Q96CW9 530 aa11.27□□□□□ -0.61
SRPRA-202ENST00000527817 WDYHV1Q96HA8 205 aa11.27□□□□□ -0.61
SRPRA-202ENST00000527817 JSRP1Q96MG2 331 aaPredicted RBP11.27□□□□□ -0.61
SRPRA-202ENST00000527817 TRIB1Q96RU8 372 aa11.27□□□□□ -0.61
SRPRA-202ENST00000527817 RBM24Q9BX46 236 aaKnown RBP11.27□□□□□ -0.61
SRPRA-202ENST00000527817 CAPS2Q9BXY5 557 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms