RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 DNAJB14Q8TBM8 379 aa6.09□□□□□ -1.43
CD44-214ENST00000525211 PROKR1Q8TCW9 393 aa6.09□□□□□ -1.43
CD44-214ENST00000525211 FGF11Q92914 225 aa6.09□□□□□ -1.43
CD44-214ENST00000525211 PPWD1Q96BP3 646 aaKnown RBP6.09□□□□□ -1.43
CD44-214ENST00000525211 SEC16BQ96JE7 1060 aa6.09□□□□□ -1.43
CD44-214ENST00000525211 KCNC2Q96PR1 638 aa6.09□□□□□ -1.43
CD44-214ENST00000525211 WDR77Q9BQA1 342 aaPredicted RBP6.09□□□□□ -1.43
CD44-214ENST00000525211 ZPBPQ9BS86 351 aa6.09□□□□□ -1.43
CD44-214ENST00000525211 TMEM120AQ9BXJ8 343 aa6.09□□□□□ -1.43
CD44-214ENST00000525211 NLNQ9BYT8 704 aa6.09□□□□□ -1.43
CD44-214ENST00000525211 TRIM4Q9C037 500 aa6.09□□□□□ -1.43
CD44-214ENST00000525211 B3GNT4Q9C0J1 378 aa6.09□□□□□ -1.43
CD44-214ENST00000525211 SLC7A5P2Q9GIP4 190 aa6.09□□□□□ -1.43
CD44-214ENST00000525211 FAM107BQ9H098 131 aa6.09□□□□□ -1.43
CD44-214ENST00000525211 ZNF385DQ9H6B1 395 aa6.09□□□□□ -1.43
CD44-214ENST00000525211 CCDC86Q9H6F5 360 aaKnown RBP6.09□□□□□ -1.43
CD44-214ENST00000525211 THSD1Q9NS62 852 aa6.09□□□□□ -1.43
CD44-214ENST00000525211 AIG1Q9NVV5 245 aa6.09□□□□□ -1.43
CD44-214ENST00000525211 SIRT5Q9NXA8 310 aa6.09□□□□□ -1.43
CD44-214ENST00000525211 MCM8Q9UJA3 840 aa6.09□□□□□ -1.43
CD44-214ENST00000525211 ADAM21Q9UKJ8 722 aa6.09□□□□□ -1.43
CD44-214ENST00000525211 SRPK3Q9UPE1 567 aa6.09□□□□□ -1.43
CD44-214ENST00000525211 FARSAQ9Y285 508 aaKnown RBP6.09□□□□□ -1.43
CD44-214ENST00000525211 PTRH2Q9Y3E5 179 aaKnown RBP6.09□□□□□ -1.43
CD44-214ENST00000525211 PCDHA9Q9Y5H5 950 aa6.09□□□□□ -1.43
CD44-214ENST00000525211 GPR45Q9Y5Y3 372 aa6.09□□□□□ -1.43
CD44-214ENST00000525211 HS3ST3B1Q9Y662 390 aa6.09□□□□□ -1.43
CD44-214ENST00000525211 LAMA5O15230 3695 aa6.09□□□□□ -1.43
CD44-214ENST00000525211 MED13Q9UHV7 2174 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 A0A0G2JND7 137 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 GMNCA6NCL1 334 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 ASPDHA6ND91 283 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 GABRR3A8MPY1 467 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 SOCS6O14544 535 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 KLK10O43240 276 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 NDUFB5O43674 189 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 SHOX2O60902 331 aaPredicted RBP6.08□□□□□ -1.44
CD44-214ENST00000525211 FHP07954 510 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 PRKAR1AP10644 381 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 LIPCP11150 499 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 LAMP1P11279 417 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 PIM1P11309 404 aaPredicted RBP6.08□□□□□ -1.44
CD44-214ENST00000525211 RNH1P13489 461 aaKnown RBP6.08□□□□□ -1.44
CD44-214ENST00000525211 LBPP18428 481 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 GPX3P22352 226 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 CPN2P22792 545 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 PTPN4P29074 926 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 FEN1P39748 380 aaKnown RBP6.08□□□□□ -1.44
CD44-214ENST00000525211 AVPR1BP47901 424 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 DGKQP52824 942 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 MAPK12P53778 367 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 WNT3P56703 355 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 PHEXP78562 749 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 TNFRSF17Q02223 184 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 FOLH1Q04609 750 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 EMX2Q04743 252 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 EEF1A2Q05639 463 aaKnown RBP6.08□□□□□ -1.44
CD44-214ENST00000525211 ZNF33BQ06732 778 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 C2orf80Q0P641 193 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 Q0VFX4 171 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 CHAF1BQ13112 559 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 DUSP8Q13202 625 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 MAP7Q14244 749 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 ATP6AP1LQ52LC2 224 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 YOD1Q5VVQ6 348 aaPredicted RBP6.08□□□□□ -1.44
CD44-214ENST00000525211 NXNQ6DKJ4 435 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 PAOXQ6QHF9 649 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 FAM111BQ6SJ93 734 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 CYP20A1Q6UW02 462 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 KIRREL2Q6UWL6 708 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 NUDT13Q86X67 352 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 TREML1Q86YW5 311 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 FUNDC1Q8IVP5 155 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 ESX1Q8N693 406 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 FNDC5Q8NAU1 212 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 SUN3Q8TAQ9 357 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 ACTRT2Q8TDY3 377 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 ADAMTS17Q8TE56 1095 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 CIDECQ96AQ7 238 aaPredicted RBP6.08□□□□□ -1.44
CD44-214ENST00000525211 TBC1D20Q96BZ9 403 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 MIEF2Q96C03 454 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 MVB12AQ96EY5 273 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 CNRIP1Q96F85 164 aaPredicted RBP6.08□□□□□ -1.44
CD44-214ENST00000525211 CHMP6Q96FZ7 201 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 HSH2DQ96JZ2 352 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 FAR2Q96K12 515 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 MAGEB10Q96LZ2 347 aaPredicted RBP6.08□□□□□ -1.44
CD44-214ENST00000525211 ZNF681Q96N22 645 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 TGIF2Q9GZN2 237 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 SLC26A1Q9H2B4 701 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 CPNE5Q9HCH3 593 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 LYRM4Q9HD34 91 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 MYNNQ9NPC7 610 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 ATP13A2Q9NQ11 1180 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 SLC52A3Q9NQ40 469 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 DKK4Q9UBT3 224 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 ZNF282Q9UDV7 671 aaPredicted RBP6.08□□□□□ -1.44
CD44-214ENST00000525211 VTI1BQ9UEU0 232 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 C3orf18Q9UK00 162 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 ZNF223Q9UK11 482 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms