RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 FAM76AQ8TAV0 307 aa11.74□□□□□ -0.53
VEGFA-225ENST00000523950 PNPLA2Q96AD5 504 aa11.74□□□□□ -0.53
VEGFA-225ENST00000523950 ANKRD9Q96BM1 317 aaPredicted RBP11.74□□□□□ -0.53
VEGFA-225ENST00000523950 TLCD1Q96CP7 247 aa11.74□□□□□ -0.53
VEGFA-225ENST00000523950 VMP1Q96GC9 406 aa11.74□□□□□ -0.53
VEGFA-225ENST00000523950 DGAT2Q96PD7 388 aa11.74□□□□□ -0.53
VEGFA-225ENST00000523950 FAIM2Q9BWQ8 316 aa11.74□□□□□ -0.53
VEGFA-225ENST00000523950 ALOXE3Q9BYJ1 711 aa11.74□□□□□ -0.53
VEGFA-225ENST00000523950 SHCBP1LQ9BZQ2 653 aa11.74□□□□□ -0.53
VEGFA-225ENST00000523950 KCNK9Q9NPC2 374 aa11.74□□□□□ -0.53
VEGFA-225ENST00000523950 PNO1Q9NRX1 252 aaKnown RBP11.74□□□□□ -0.53
VEGFA-225ENST00000523950 ABI3Q9P2A4 366 aa11.74□□□□□ -0.53
VEGFA-225ENST00000523950 PTGFRNQ9P2B2 879 aa11.74□□□□□ -0.53
VEGFA-225ENST00000523950 CLCA3PQ9Y6N3 262 aa11.74□□□□□ -0.53
VEGFA-225ENST00000523950 DYTNA2CJ06 578 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 TMEM114B3SHH9 223 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 RGS14O43566 566 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 PCDH7O60245 1069 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 FGF17O60258 216 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 LDB3O75112 727 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 GPR75O95800 540 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 GBAP04062 536 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 IFNA16P05015 189 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 SERPINE1P05121 402 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 CELA2AP08217 269 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 GRK2P25098 689 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 TIA1P31483 386 aaKnown RBP eCLIP11.73□□□□□ -0.539e-14■■■□□ 15.1
VEGFA-225ENST00000523950 CLCN2P51788 898 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 HMGCS1Q01581 520 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 FOLH1Q04609 750 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 MEP1AQ16819 746 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 HSP90B2PQ58FF3 399 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 ARL13AQ5H913 290 aaPredicted RBP11.73□□□□□ -0.53
VEGFA-225ENST00000523950 NDUFAF5Q5TEU4 345 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 AGBL2Q5U5Z8 902 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 Q6ZS92 163 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 ZNF771Q7L3S4 317 aaPredicted RBP11.73□□□□□ -0.53
VEGFA-225ENST00000523950 ST13P4Q8IZP2 240 aaPredicted RBP11.73□□□□□ -0.53
VEGFA-225ENST00000523950 ARMC10Q8N2F6 343 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 SIRT6Q8N6T7 355 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 GOLGA6L1Q8N7Z2 621 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 DNAJB14Q8TBM8 379 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 HAS2Q92819 552 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 C11orf24Q96F05 449 aaPredicted RBP11.73□□□□□ -0.53
VEGFA-225ENST00000523950 RBM18Q96H35 190 aaKnown RBP11.73□□□□□ -0.53
VEGFA-225ENST00000523950 ART5Q96L15 291 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 CCT7Q99832 543 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 RYDENQ9NUL5 291 aaKnown RBP11.73□□□□□ -0.53
VEGFA-225ENST00000523950 TEX10Q9NXF1 929 aaPredicted RBP11.73□□□□□ -0.53
VEGFA-225ENST00000523950 B3GNT3Q9Y2A9 372 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 WBP11Q9Y2W2 641 aaKnown RBP11.73□□□□□ -0.53
VEGFA-225ENST00000523950 TRAF6Q9Y4K3 522 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 PCDHA9Q9Y5H5 950 aa11.73□□□□□ -0.53
VEGFA-225ENST00000523950 A8MUA0 341 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 SORBS2O94875 1100 aaKnown RBP11.72□□□□□ -0.53
VEGFA-225ENST00000523950 CHRNGP07510 517 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 DRD2P14416 443 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 CHN1P15882 459 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 ALOX15P16050 662 aaPredicted RBP11.72□□□□□ -0.53
VEGFA-225ENST00000523950 TNNI3P19429 210 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 PIK3R1P27986 724 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 SERPINB3P29508 390 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 GPR143P51810 404 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 MAGOHP61326 146 aaKnown RBP11.72□□□□□ -0.53
VEGFA-225ENST00000523950 HEPACAMQ14CZ8 416 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 TLR1Q15399 786 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 SPRED3Q2MJR0 410 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 NADK2Q4G0N4 442 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 SPDYAQ5MJ70 313 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 B3GNTL1Q67FW5 361 aaPredicted RBP11.72□□□□□ -0.53
VEGFA-225ENST00000523950 SLC6A19Q695T7 634 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 CLEC6AQ6EIG7 209 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 SLC48A1Q6P1K1 146 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 LINC00696Q6ZRV3 163 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 ZCCHC23Q6ZST2 131 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 ZNF605Q86T29 641 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 APCDD1LQ8NCL9 501 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 OR8K3Q8NH51 312 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 TM4SF18Q96CE8 201 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 APIPQ96GX9 242 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 TNFRSF12AQ9NP84 129 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 PFDN4Q9NQP4 134 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 PSME2Q9UL46 239 aa11.72□□□□□ -0.53
VEGFA-225ENST00000523950 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.72□□□□□ -0.53
VEGFA-225ENST00000523950 GNG14A0A1W2PPG7 69 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 TMEM120BA0PK00 339 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 A8MUI8 341 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 C17orf105B2RV13 164 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 SLC28A2O43868 658 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 PRKRAO75569 313 aaKnown RBP11.71□□□□□ -0.53
VEGFA-225ENST00000523950 ZFAND5O76080 213 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 HSPA4LO95757 839 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 SLC35E2P0CK97 266 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 RAE1P78406 368 aaKnown RBP11.71□□□□□ -0.53
VEGFA-225ENST00000523950 ARG2P78540 354 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 ZNF763Q0D2J5 394 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 CHI3L2Q15782 390 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 ACER2Q5QJU3 275 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 SH2D4BQ5SQS7 431 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 HHATQ5VTY9 493 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms