RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 CSO75390 466 aaKnown RBP3.55□□□□□ -1.84
SQLE-204ENST00000520493 KHDRBS3O75525 346 aaKnown RBP3.55□□□□□ -1.84
SQLE-204ENST00000520493 CSDE1O75534 798 aaKnown RBP3.55□□□□□ -1.84
SQLE-204ENST00000520493 TOM1L1O75674 476 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 AP2A2O94973 939 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 SYNGR4O95473 234 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 PRAMEF12O95522 483 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 CPNE6O95741 557 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 GPIP06744 558 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 ZNF883P0CG24 379 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 FAM157CP0CG43 387 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 PRKAR1AP10644 381 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 SLC2A2P11168 524 aaPredicted RBP3.55□□□□□ -1.84
SQLE-204ENST00000520493 HLA-FP30511 346 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 ALDH1B1P30837 517 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 CHRNB4P30926 498 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 SLC6A8P48029 635 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 CCL11P51671 97 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 OR1D5P58170 312 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 HERV-K104P63124 156 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 MYBPC1Q00872 1141 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 SQLEQ14534 574 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 SPHARQ15513 63 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 ZKSCAN8Q15776 578 aaPredicted RBP3.55□□□□□ -1.84
SQLE-204ENST00000520493 MAJINQ3KP22 176 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 SLC36A3Q495N2 470 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 C14orf177Q52M58 125 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 SLC25A53Q5H9E4 307 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 CFAP157Q5JU67 520 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 ZNF776Q68DI1 518 aaPredicted RBP3.55□□□□□ -1.84
SQLE-204ENST00000520493 ARHGAP17Q68EM7 881 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 SLC27A4Q6P1M0 643 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 CES3Q6UWW8 571 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 ADGRD2Q7Z7M1 963 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 SLC43A2Q8N370 569 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 LRRC17Q8N6Y2 441 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 COLGALT1Q8NBJ5 622 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 OR10G8Q8NGN5 311 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 OR2T34Q8NGX1 318 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 APOBEC4Q8WW27 367 aaKnown RBP3.55□□□□□ -1.84
SQLE-204ENST00000520493 CASP10Q92851 521 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 NCLNQ969V3 563 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 RAB39BQ96DA2 213 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 S1PR3Q99500 378 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 IL12RB2Q99665 862 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 LITAFQ99732 161 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 TDRD1Q9BXT4 1180 aaKnown RBP3.55□□□□□ -1.84
SQLE-204ENST00000520493 NACA2Q9H009 215 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 SIX2Q9NPC8 291 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 DDX28Q9NUL7 540 aaKnown RBP3.55□□□□□ -1.84
SQLE-204ENST00000520493 NSG2Q9Y328 171 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 MMP24Q9Y5R2 645 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 SELENOKQ9Y6D0 94 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 ARID2Q68CP9 1835 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 A0A087WUV0 522 aaPredicted RBP3.54□□□□□ -1.84
SQLE-204ENST00000520493 ATP6AP2A0A1C7CYW4 349 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 CCDC162PA2VCL2 907 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 A8MVM7 634 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 H3BMM5 538 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 CXCL11O14625 94 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 TLX2O43763 284 aaPredicted RBP3.54□□□□□ -1.84
SQLE-204ENST00000520493 CIDEAO60543 219 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 CYTIPO60759 359 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 TSC22D2O75157 780 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 ZNF821O75541 412 aaPredicted RBP3.54□□□□□ -1.84
SQLE-204ENST00000520493 SEC24AO95486 1093 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 NADKO95544 446 aaPredicted RBP3.54□□□□□ -1.84
SQLE-204ENST00000520493 MT-ND2P03891 347 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 ERVK-10P10266 1014 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 RRASP10301 218 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 EPB41P11171 864 aaKnown RBP3.54□□□□□ -1.84
SQLE-204ENST00000520493 ODC1P11926 461 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 CEACAM1P13688 526 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 GP9P14770 177 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 B4GALT1P15291 398 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 GNSP15586 552 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 AADACP22760 399 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 HTR2AP28223 471 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 TMOD1P28289 359 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 OR3A2P47893 321 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 TDO2P48775 406 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 TAF6P49848 677 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 SULT1E1P49888 294 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 DCDC1P59894 354 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 IL24Q13007 206 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 SNTB2Q13425 540 aaKnown RBP3.54□□□□□ -1.84
SQLE-204ENST00000520493 GPR50Q13585 617 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 ITGA9Q13797 1035 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 CEACAM7Q14002 265 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 ZNF74Q16587 644 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 RABL6Q3YEC7 729 aaPredicted RBP3.54□□□□□ -1.84
SQLE-204ENST00000520493 LDLRAP1Q5SW96 308 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 ARHGEF16Q5VV41 709 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 SNRNP48Q6IEG0 339 aaKnown RBP3.54□□□□□ -1.84
SQLE-204ENST00000520493 SULT1C3Q6IMI6 304 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 LRRC8BQ6P9F7 803 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 SLC25A47Q6Q0C1 308 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 LPCAT2Q7L5N7 544 aa3.54□□□□□ -1.84
SQLE-204ENST00000520493 TRMT11Q7Z4G4 463 aaKnown RBP3.54□□□□□ -1.84
SQLE-204ENST00000520493 YRDCQ86U90 279 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms