RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 VPS54Q9P1Q0 977 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 PSORS1C1Q9UIG5 152 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 TRMT6Q9UJA5 497 aaKnown RBP2.47□□□□□ -2.01
SKP1-203ENST00000517625 SH3GLB1Q9Y371 365 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 OR1A2Q9Y585 309 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 COL2A1P02458 1487 aaPredicted RBP2.46□□□□□ -2.02
SKP1-203ENST00000517625 TRGV8A0A0C4DH27 118 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 TRBV5-4A0A0C4DH59 114 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 C5orf51A6NDU8 294 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 IGLON5A6NGN9 336 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 GLTPD2A6NH11 291 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 RNF212BA8MTL3 300 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 B4GAT1O43505 415 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 PI15O43692 258 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 TSPAN2O60636 221 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 TXNDC12O95881 172 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 HOXD4P09016 255 aaPredicted RBP2.46□□□□□ -2.02
SKP1-203ENST00000517625 NUDT17P0C025 328 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 TPBGLP0DKB5 382 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 GPX3P22352 226 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 SHC1P29353 583 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 NSFP46459 744 aaKnown RBP2.46□□□□□ -2.02
SKP1-203ENST00000517625 NUMBP49757 651 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 NT5C2P49902 561 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 GEMP55040 296 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 NDUFV3P56181 108 aaKnown RBP2.46□□□□□ -2.02
SKP1-203ENST00000517625 MSLNQ13421 630 aaPredicted RBP2.46□□□□□ -2.02
SKP1-203ENST00000517625 PDE7AQ13946 482 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 GK2Q14410 553 aaPredicted RBP2.46□□□□□ -2.02
SKP1-203ENST00000517625 LASP1Q14847 261 aaKnown RBP2.46□□□□□ -2.02
SKP1-203ENST00000517625 KRTAP27-1Q3LI81 207 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 NKAIN2Q5VXU1 208 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 SEL1L3Q68CR1 1132 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 HIST2H2AA3Q6FI13 130 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 RHBDD2Q6NTF9 364 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 FBXL22Q6P050 247 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 ZNF841Q6ZN19 808 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 Q6ZRG5 221 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 GPRIN3Q6ZVF9 776 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 TOM1L2Q6ZVM7 507 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 NUFIP2Q7Z417 695 aaKnown RBP2.46□□□□□ -2.02
SKP1-203ENST00000517625 KCNMB4Q86W47 210 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 ERC1Q8IUD2 1116 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 LRRC49Q8IUZ0 686 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 PEX5LQ8IYB4 626 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 CARNMT1Q8N4J0 409 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 ZNF713Q8N859 430 aaPredicted RBP2.46□□□□□ -2.02
SKP1-203ENST00000517625 ZNF781Q8N8C0 355 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 C4orf32Q8N8J7 132 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 CSNK1G2-AS1Q8NCQ2 148 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 RDH11Q8TC12 318 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 RNASE8Q8TDE3 154 aaKnown RBP2.46□□□□□ -2.02
SKP1-203ENST00000517625 FAM222BQ8WU58 562 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 WBP1Q96G27 269 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 CDHR1Q96JP9 859 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 RPGRIP1Q96KN7 1286 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 RUNDC3BQ96NL0 473 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 RCHY1Q96PM5 261 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 TAAR6Q96RI8 345 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 NTMT1Q9BV86 223 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 TEX13AQ9BXU3 409 aaPredicted RBP2.46□□□□□ -2.02
SKP1-203ENST00000517625 DPEP3Q9H4B8 488 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 DCLRE1BQ9H816 532 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 PIGVQ9NUD9 493 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 TECRQ9NZ01 308 aaKnown RBP2.46□□□□□ -2.02
SKP1-203ENST00000517625 SENP1Q9P0U3 644 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 NARFQ9UHQ1 456 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 MRTO4Q9UKD2 239 aaKnown RBP2.46□□□□□ -2.02
SKP1-203ENST00000517625 NIP7Q9Y221 180 aaKnown RBP eCLIP2.46□□□□□ -2.02
SKP1-203ENST00000517625 TDRKHQ9Y2W6 561 aaKnown RBP2.46□□□□□ -2.02
SKP1-203ENST00000517625 MRPL11Q9Y3B7 192 aaKnown RBP2.46□□□□□ -2.02
SKP1-203ENST00000517625 ATG4BQ9Y4P1 393 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 CSAG2Q9Y5P2 127 aa2.46□□□□□ -2.02
SKP1-203ENST00000517625 FGD5Q6ZNL6 1462 aa2.45□□□□□ -2.02
SKP1-203ENST00000517625 SPAG9O60271 1321 aaKnown RBP2.45□□□□□ -2.02
SKP1-203ENST00000517625 A0A0U1RQG5 324 aaPredicted RBP2.45□□□□□ -2.02
SKP1-203ENST00000517625 TRIM49BA6NDI0 452 aa2.45□□□□□ -2.02
SKP1-203ENST00000517625 SLC9B1P1A6NJY1 282 aa2.45□□□□□ -2.02
SKP1-203ENST00000517625 ACOD1A6NK06 481 aa2.45□□□□□ -2.02
SKP1-203ENST00000517625 ZNF724A8MTY0 619 aa2.45□□□□□ -2.02
SKP1-203ENST00000517625 MEI4A8MW99 385 aa2.45□□□□□ -2.02
SKP1-203ENST00000517625 EEF2KO00418 725 aaKnown RBP2.45□□□□□ -2.02
SKP1-203ENST00000517625 ZNF749O43361 778 aa2.45□□□□□ -2.02
SKP1-203ENST00000517625 TXNL1O43396 289 aa2.45□□□□□ -2.02
SKP1-203ENST00000517625 ZBTB14O43829 449 aa2.45□□□□□ -2.02
SKP1-203ENST00000517625 NME2P1O60361 137 aa2.45□□□□□ -2.02
SKP1-203ENST00000517625 KERAO60938 352 aa2.45□□□□□ -2.02
SKP1-203ENST00000517625 ANXA9O76027 345 aa2.45□□□□□ -2.02
SKP1-203ENST00000517625 FCER2P06734 321 aa2.45□□□□□ -2.02
SKP1-203ENST00000517625 CHRNGP07510 517 aa2.45□□□□□ -2.02
SKP1-203ENST00000517625 ABHD2P08910 425 aa2.45□□□□□ -2.02
SKP1-203ENST00000517625 MBL2P11226 248 aaPredicted RBP2.45□□□□□ -2.02
SKP1-203ENST00000517625 FOSL2P15408 326 aa2.45□□□□□ -2.02
SKP1-203ENST00000517625 AREGP15514 252 aa2.45□□□□□ -2.02
SKP1-203ENST00000517625 GATA1P15976 413 aaPredicted RBP2.45□□□□□ -2.02
SKP1-203ENST00000517625 ZNF10P21506 573 aaPredicted RBP2.45□□□□□ -2.02
SKP1-203ENST00000517625 IL4RP24394 825 aa2.45□□□□□ -2.02
SKP1-203ENST00000517625 SPRP35270 261 aaPredicted RBP2.45□□□□□ -2.02
SKP1-203ENST00000517625 ETV5P41161 510 aa2.45□□□□□ -2.02
SKP1-203ENST00000517625 SLC1A4P43007 532 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms