RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 CALR3Q96L12 384 aaKnown RBP9.6□□□□□ -0.87
CLDND1-231ENST00000515620 HS3ST6Q96QI5 342 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 HIST1H2AJQ99878 128 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 AIF1LQ9BQI0 150 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 H2AFJQ9BTM1 129 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 NPLQ9BXD5 320 aaPredicted RBP9.6□□□□□ -0.87
CLDND1-231ENST00000515620 UGT2B28Q9BY64 529 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 CALHM2Q9HA72 323 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 KLHL28Q9NXS3 571 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 CNIH4Q9P003 139 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 VTI1BQ9UEU0 232 aa9.6□□□□□ -0.87
CLDND1-231ENST00000515620 CNOT11Q9UKZ1 510 aaKnown RBP9.6□□□□□ -0.87
CLDND1-231ENST00000515620 CHCHD2Q9Y6H1 151 aaPredicted RBP9.6□□□□□ -0.87
CLDND1-231ENST00000515620 BTNL10A8MVZ5 291 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 RNF223E7ERA6 249 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 CYR61O00622 381 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 WIPF1O43516 503 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 CTNSO60931 367 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 LDB3O75112 727 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 ACSL3O95573 720 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 FTCDO95954 541 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 C1QAP02745 245 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 TP53P04637 393 aaPredicted RBP9.59□□□□□ -0.87
CLDND1-231ENST00000515620 SOX18P35713 384 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 CDK9P50750 372 aaKnown RBP9.59□□□□□ -0.87
CLDND1-231ENST00000515620 PLA2G16P53816 162 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 LIM2P55344 173 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 ID2Q02363 134 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 DHX34Q14147 1143 aaKnown RBP9.59□□□□□ -0.87
CLDND1-231ENST00000515620 CAPRIN1Q14444 709 aaKnown RBP9.59□□□□□ -0.87
CLDND1-231ENST00000515620 TOMM20Q15388 145 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 PLXDC2Q6UX71 529 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 HIPK1Q86Z02 1210 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 KLHDC8AQ8IYD2 350 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 GCNT2Q8N0V5 402 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 MEIOBQ8N635 442 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 NUBPLQ8TB37 319 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 ZNF721Q8TF20 911 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 SLC44A1Q8WWI5 657 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 ZNF669Q96BR6 464 aaPredicted RBP9.59□□□□□ -0.87
CLDND1-231ENST00000515620 INTS12Q96CB8 462 aaKnown RBP9.59□□□□□ -0.87
CLDND1-231ENST00000515620 MS4A6EQ96DS6 147 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 LINGO1Q96FE5 620 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 WFIKKN1Q96NZ8 548 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 NDNQ99608 321 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 MED18Q9BUE0 208 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 PELI2Q9HAT8 420 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 YAE1D1Q9NRH1 226 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 ZNF226Q9NYT6 803 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 DYRK1BQ9Y463 629 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 WIF1Q9Y5W5 379 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 COMMD10Q9Y6G5 202 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 DOCK7Q96N67 2140 aa9.59□□□□□ -0.87
CLDND1-231ENST00000515620 A0A087X1B8 175 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 A0A088AWK7 358 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 MIF4GDA9UHW6 222 aaKnown RBP9.58□□□□□ -0.88
CLDND1-231ENST00000515620 TRIM3O75382 744 aaPredicted RBP9.58□□□□□ -0.88
CLDND1-231ENST00000515620 GUCA1CO95843 209 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 HPNP05981 417 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 CYP4B1P13584 511 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 ZNF10P21506 573 aaPredicted RBP9.58□□□□□ -0.88
CLDND1-231ENST00000515620 CRYGSP22914 178 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 MC3RP41968 323 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 MSH2P43246 934 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 SLCO1A2P46721 670 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 MASP1P48740 699 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 TERF1P54274 439 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 DIO3P55073 304 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 ATP5J2P56134 94 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 VEZF1Q14119 521 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 RCN2Q14257 317 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 EFTUD2Q15029 972 aaKnown RBP eCLIP9.58□□□□□ -0.88
CLDND1-231ENST00000515620 KCTD19Q17RG1 926 aaPredicted RBP9.58□□□□□ -0.88
CLDND1-231ENST00000515620 KRTAP24-1Q3LI83 254 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 EIPR1Q53HC9 387 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 WIPI1Q5MNZ9 446 aaPredicted RBP9.58□□□□□ -0.88
CLDND1-231ENST00000515620 BICRALQ6AI39 1079 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 UGT3A1Q6NUS8 523 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 NXPE4Q6UWF7 544 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 PLEKHM3Q6ZWE6 761 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 CCDC170Q8IYT3 715 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 TMEM171Q8WVE6 324 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 DIO2Q92813 273 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 FBXL8Q96CD0 374 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 QRFPRQ96P65 431 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 GAL3ST4Q96RP7 486 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 TM9SF2Q99805 663 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 TUBA1CQ9BQE3 449 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 FRMD8P1Q9BZ68 369 aaPredicted RBP9.58□□□□□ -0.88
CLDND1-231ENST00000515620 TSGA10Q9BZW7 698 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 PIGMQ9H3S5 423 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 PACSIN3Q9UKS6 424 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 DAPP1Q9UN19 280 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 C15orf41Q9Y2V0 281 aa9.58□□□□□ -0.88
CLDND1-231ENST00000515620 RAI1Q7Z5J4 1906 aaPredicted RBP9.57□□□□□ -0.88
CLDND1-231ENST00000515620 DSCAMO60469 2012 aa9.57□□□□□ -0.88
CLDND1-231ENST00000515620 TCRBV7S3A2A0A539 114 aa9.57□□□□□ -0.88
CLDND1-231ENST00000515620 LRIT2A6NDA9 550 aa9.57□□□□□ -0.88
CLDND1-231ENST00000515620 A8MXE2 369 aa9.57□□□□□ -0.88
CLDND1-231ENST00000515620 HAUS5O94927 633 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms