RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 CNRIP1Q96F85 164 aaPredicted RBP14.14□□□□□ -0.15
VCAN-211ENST00000513984 BBS4Q96RK4 519 aa14.14□□□□□ -0.15
VCAN-211ENST00000513984 HRASLS2Q9NWW9 162 aa14.14□□□□□ -0.15
VCAN-211ENST00000513984 U3KQV3 271 aa14.14□□□□□ -0.15
VCAN-211ENST00000513984 SPAG17Q6Q759 2223 aa14.14□□□□□ -0.15
VCAN-211ENST00000513984 OR5K3A6NET4 321 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 GLOD5A6NK44 160 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 WASHC1A8K0Z3 465 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 CLPTM1O96005 669 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 OPN1SWP03999 348 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 NME1P15531 152 aaKnown RBP14.13□□□□□ -0.15
VCAN-211ENST00000513984 DNAJA1P31689 397 aaKnown RBP14.13□□□□□ -0.15
VCAN-211ENST00000513984 MAGEA8P43361 318 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 NCBP2P52298 156 aaKnown RBP eCLIP14.13□□□□□ -0.15
VCAN-211ENST00000513984 RACK1P63244 317 aaKnown RBP14.13□□□□□ -0.15
VCAN-211ENST00000513984 SUZ12Q15022 739 aaKnown RBP14.13□□□□□ -0.15
VCAN-211ENST00000513984 KCTD21Q4G0X4 260 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 FOXB2Q5VYV0 432 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 REEP3Q6NUK4 255 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 Q7L0L9 218 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 OOSP2Q86WS3 158 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 ARL10Q8N8L6 244 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 SFXN5Q8TD22 340 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 LZICQ8WZA0 190 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 MAPKAP1Q9BPZ7 522 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 TOR3AQ9H497 397 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 SOX17Q9H6I2 414 aaPredicted RBP14.13□□□□□ -0.15
VCAN-211ENST00000513984 TMEFF2Q9UIK5 374 aaPredicted RBP14.13□□□□□ -0.15
VCAN-211ENST00000513984 ENTPD4Q9Y227 616 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 A0A1B0GTW7 788 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 M0QX08 132 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 HMGN4O00479 90 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 ERAL1O75616 437 aaKnown RBP14.13□□□□□ -0.15
VCAN-211ENST00000513984 DIRAS1O95057 198 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 PGM3O95394 542 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 CLIC3O95833 236 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 NELFEP18615 380 aaKnown RBP14.13□□□□□ -0.15
VCAN-211ENST00000513984 GPC1P35052 558 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 RPS26P62854 115 aaKnown RBP14.13□□□□□ -0.15
VCAN-211ENST00000513984 SNRPNP63162 240 aaKnown RBP14.13□□□□□ -0.15
VCAN-211ENST00000513984 ELOCQ15369 112 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 RFX4Q33E94 735 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 ZIK1Q3SY52 487 aaPredicted RBP14.13□□□□□ -0.15
VCAN-211ENST00000513984 LIN52Q52LA3 116 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 IFI44LQ53G44 452 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 TNFAIP8L2Q6P589 184 aaPredicted RBP14.13□□□□□ -0.15
VCAN-211ENST00000513984 CEP68Q76N32 757 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 DGLUCYQ7Z3D6 616 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 TSEN54Q7Z6J9 526 aaKnown RBP14.13□□□□□ -0.15
VCAN-211ENST00000513984 CAMKK1Q8N5S9 505 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 DEFB119Q8N690 84 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 CLDN23Q96B33 292 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 GUCD1Q96NT3 240 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 TRAPPC9Q96Q05 1148 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 SERINC2Q96SA4 455 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 MBOAT4Q96T53 435 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 SERHL2Q9H4I8 314 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 CLK4Q9HAZ1 481 aaKnown RBP14.13□□□□□ -0.15
VCAN-211ENST00000513984 THUMPD1Q9NXG2 353 aaKnown RBP14.13□□□□□ -0.15
VCAN-211ENST00000513984 C3orf18Q9UK00 162 aa14.13□□□□□ -0.15
VCAN-211ENST00000513984 TRIM64A6NGJ6 449 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 B4DGG1 531 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 HS6ST1O60243 411 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 TFAP2AP05549 437 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 NR2F6P10588 404 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 PVRP15151 417 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 CSNK2A2P19784 350 aaPredicted RBP14.12□□□□□ -0.15
VCAN-211ENST00000513984 PRKACGP22612 351 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 RPL5P46777 297 aaKnown RBP14.12□□□□□ -0.15
VCAN-211ENST00000513984 ARHGDIAP52565 204 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 TNFRSF17Q02223 184 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 DUSP2Q05923 314 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 ZP2Q05996 745 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 TP53BP2Q13625 1128 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 ZC3H12BQ5HYM0 836 aaKnown RBP14.12□□□□□ -0.15
VCAN-211ENST00000513984 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.12□□□□□ -0.15
VCAN-211ENST00000513984 TTC23Q5W5X9 447 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 ANKRD34AQ69YU3 496 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 FRMPD2BQ6IN97 320 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 OFCC1Q8IZS5 231 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 AVL9Q8NBF6 648 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 SLC38A5Q8WUX1 472 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 KLHL6Q8WZ60 621 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 MOAP1Q96BY2 351 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 SLC35G5Q96KT7 338 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 EPYCQ99645 322 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 KLHL25Q9H0H3 589 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 CXorf56Q9H5V9 222 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 REEP1Q9H902 201 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 TBC1D17Q9HA65 648 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 PRDM9Q9NQV7 894 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 THSD1Q9NS62 852 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 SEMA3GQ9NS98 782 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 GIMAP4Q9NUV9 329 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 PHF11Q9UIL8 331 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 POMT2Q9UKY4 750 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 SAMHD1Q9Y3Z3 626 aaKnown RBP14.12□□□□□ -0.15
VCAN-211ENST00000513984 ZNF451Q9Y4E5 1061 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 DNAH14Q0VDD8 3507 aa14.12□□□□□ -0.15
VCAN-211ENST00000513984 LOC105369274A0A096LPK9 316 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms