RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 MRPS33Q9Y291 106 aaKnown RBP12.83□□□□□ -0.36
SPCS3-204ENST00000513139 SONP18583 2426 aaKnown RBP12.82□□□□□ -0.36
SPCS3-204ENST00000513139 IL2RAP01589 272 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 HRGP04196 525 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 RNF4P78317 190 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 PPP2R2BQ00005 443 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 REEP5Q00765 189 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 CALCOCO2Q13137 446 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 SF3B4Q15427 424 aaKnown RBP eCLIP12.82□□□□□ -0.363e-6■■■■□ 24.5
SPCS3-204ENST00000513139 GLE1Q53GS7 698 aaKnown RBP12.82□□□□□ -0.36
SPCS3-204ENST00000513139 Q5PR19 223 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 CASC4Q6P4E1 433 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 PRSS57Q6UWY2 283 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 MYO1HQ8N1T3 1032 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 BBOF1Q8ND07 529 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 OR5L2Q8NGL0 311 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 OR14A16Q8NHC5 309 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 CALML6Q8TD86 181 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 SLC5A11Q8WWX8 675 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 ATL1Q8WXF7 558 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 IFT81Q8WYA0 676 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 SMPDL3BQ92485 455 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 FAR2Q96K12 515 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 PIP5K1AQ99755 562 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 AIF1LQ9BQI0 150 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 YIPF4Q9BSR8 244 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 BDH2Q9BUT1 245 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 ZNF703Q9H7S9 590 aaPredicted RBP12.82□□□□□ -0.36
SPCS3-204ENST00000513139 PELI2Q9HAT8 420 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 SEMA4BQ9NPR2 832 aaPredicted RBP12.82□□□□□ -0.36
SPCS3-204ENST00000513139 ARL15Q9NXU5 204 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 VTI1BQ9UEU0 232 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 BOKQ9UMX3 212 aaPredicted RBP12.82□□□□□ -0.36
SPCS3-204ENST00000513139 MAD1L1Q9Y6D9 718 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 HEATR5AQ86XA9 2040 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 MED12LQ86YW9 2145 aa12.82□□□□□ -0.36
SPCS3-204ENST00000513139 C4orf51C9J302 202 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 H7C1Q1 480 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 SLC1A2P43004 574 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 ZNF136P52737 540 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 RAB38P57729 211 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 STXBP1P61764 594 aaKnown RBP12.81□□□□□ -0.36
SPCS3-204ENST00000513139 BTN3A2P78410 334 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 RUNX2Q13950 521 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 MPEG1Q2M385 716 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 ACSF3Q4G176 576 aaPredicted RBP12.81□□□□□ -0.36
SPCS3-204ENST00000513139 TOR1AIP1Q5JTV8 583 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 TEX35Q5T0J7 233 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 SLC22A10Q63ZE4 541 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 P3H2Q8IVL5 708 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 PDIK1LQ8N165 341 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 CIARTQ8N365 385 aaPredicted RBP12.81□□□□□ -0.36
SPCS3-204ENST00000513139 LRRC25Q8N386 305 aaPredicted RBP12.81□□□□□ -0.36
SPCS3-204ENST00000513139 LINC01560Q8TB33 94 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 FBXO25Q8TCJ0 367 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 PTPMT1Q8WUK0 201 aaPredicted RBP12.81□□□□□ -0.36
SPCS3-204ENST00000513139 GAL3ST3Q96A11 431 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 FBXL8Q96CD0 374 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 HSPBAP1Q96EW2 488 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 DACH2Q96NX9 599 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 TRIM54Q9BYV2 358 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 AICDAQ9GZX7 198 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 SH2D2AQ9NP31 389 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 ZFP64Q9NPA5 681 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 TAS2R13Q9NYV9 303 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 JKAMPQ9P055 326 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 FBXO5Q9UKT4 447 aa12.81□□□□□ -0.36
SPCS3-204ENST00000513139 A0A088AWK7 358 aa12.8□□□□□ -0.36
SPCS3-204ENST00000513139 ZCWPW2A0A1B0GU75 182 aa12.8□□□□□ -0.36
SPCS3-204ENST00000513139 PABPN1LA6NDY0 278 aaKnown RBP12.8□□□□□ -0.36
SPCS3-204ENST00000513139 ZNF354AO60765 605 aaPredicted RBP12.8□□□□□ -0.36
SPCS3-204ENST00000513139 CTNSO60931 367 aa12.8□□□□□ -0.36
SPCS3-204ENST00000513139 HAUS5O94927 633 aa12.8□□□□□ -0.36
SPCS3-204ENST00000513139 IFNA16P05015 189 aa12.8□□□□□ -0.36
SPCS3-204ENST00000513139 F7P08709 466 aaPredicted RBP12.8□□□□□ -0.36
SPCS3-204ENST00000513139 RFPL3SP0C7P2 107 aa12.8□□□□□ -0.36
SPCS3-204ENST00000513139 ZNF10P21506 573 aaPredicted RBP12.8□□□□□ -0.36
SPCS3-204ENST00000513139 ELK3P41970 407 aa12.8□□□□□ -0.36
SPCS3-204ENST00000513139 HNRNPFP52597 415 aaKnown RBP12.8□□□□□ -0.36
SPCS3-204ENST00000513139 ARL4CP56559 192 aa12.8□□□□□ -0.36
SPCS3-204ENST00000513139 TIAL1Q01085 375 aaKnown RBP eCLIP12.8□□□□□ -0.36
SPCS3-204ENST00000513139 FASTKD3Q14CZ7 662 aaKnown RBP12.8□□□□□ -0.36
SPCS3-204ENST00000513139 EFTUD2Q15029 972 aaKnown RBP eCLIP12.8□□□□□ -0.36
SPCS3-204ENST00000513139 ZNF791Q3KP31 576 aaPredicted RBP12.8□□□□□ -0.36
SPCS3-204ENST00000513139 PIGGQ5H8A4 983 aa12.8□□□□□ -0.36
SPCS3-204ENST00000513139 ANKMY2Q8IV38 441 aa12.8□□□□□ -0.36
SPCS3-204ENST00000513139 LIX1Q8N485 282 aa12.8□□□□□ -0.36
SPCS3-204ENST00000513139 TMEM52Q8NDY8 209 aa12.8□□□□□ -0.36
SPCS3-204ENST00000513139 PAQR8Q8TEZ7 354 aa12.8□□□□□ -0.36
SPCS3-204ENST00000513139 PIGTQ969N2 578 aa12.8□□□□□ -0.36
SPCS3-204ENST00000513139 ZNF669Q96BR6 464 aaPredicted RBP12.8□□□□□ -0.36
SPCS3-204ENST00000513139 WDR83Q9BRX9 315 aaKnown RBP12.8□□□□□ -0.36
SPCS3-204ENST00000513139 RRAGDQ9NQL2 400 aaPredicted RBP12.8□□□□□ -0.36
SPCS3-204ENST00000513139 ZDHHC18Q9NUE0 388 aa12.8□□□□□ -0.36
SPCS3-204ENST00000513139 ADAM21Q9UKJ8 722 aa12.8□□□□□ -0.36
SPCS3-204ENST00000513139 A0A1W2PPR1 153 aa12.79□□□□□ -0.36
SPCS3-204ENST00000513139 CYR61O00622 381 aa12.79□□□□□ -0.36
SPCS3-204ENST00000513139 B3GALT2O43825 422 aa12.79□□□□□ -0.36
SPCS3-204ENST00000513139 SMPD2O60906 423 aa12.79□□□□□ -0.36
SPCS3-204ENST00000513139 SLU7O95391 586 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms