RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 LIMK2P53671 638 aa5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 SBK1Q52WX2 424 aa5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 EPHA10Q5JZY3 1008 aa5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 OR2A2Q6IF42 318 aa5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 ZNF790Q6PG37 636 aa5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 FAM198BQ6UWH4 519 aa5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 FAM159AQ6UWV7 190 aa5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 C3P1Q6ZMU1 363 aa5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 OTOP2Q7RTS6 562 aa5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 PRSS45Q7RTY3 260 aa5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 ARHGAP24Q8N264 748 aa5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 ZNF276Q8N554 614 aa5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 ZCCHC9Q8N567 271 aaKnown RBP5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 OR1L4Q8NGR5 311 aa5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 NUDCD2Q8WVJ2 157 aa5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 ELMO1Q92556 727 aa5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 LURAP1Q96LR2 239 aa5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 RASL10BQ96S79 203 aa5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 MTERF1Q99551 399 aaKnown RBP5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 NDNQ99608 321 aa5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 TRMOQ9BU70 441 aa5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 WWTR1Q9GZV5 400 aa5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 FAM207AQ9NSI2 230 aaPredicted RBP5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 TREX1Q9NSU2 369 aa5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 SMPD4Q9NXE4 827 aa5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 HCFC2Q9Y5Z7 792 aa5.91□□□□□ -1.46
TRAPPC11-209ENST00000512476 TMEM129A0AVI4 362 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 NEURL1BA8MQ27 555 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 ERVV-1B6SEH8 477 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 NPIPA2E9PIF3 369 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 TNFRSF10AO00220 468 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 BCAS1O75363 584 aaPredicted RBP5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 LYNP07948 512 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 ERCC1P07992 297 aaPredicted RBP5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 CALM1P0DP23 149 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 CALM2P0DP24 149 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 CALM3P0DP25 149 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 ZNF182P17025 639 aaPredicted RBP5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 PSMA2P25787 234 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 GKP32189 559 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 NPBWR1P48145 328 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 GLRBP48167 497 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 PPT1P50897 306 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 KPNA2P52292 529 aaKnown RBP5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 EMP3P54852 163 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 RHAGQ02094 409 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 SLC39A6Q13433 755 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 MICBQ29980 383 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 KLHL22Q53GT1 634 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 COQ5Q5HYK3 327 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 NEPROQ6NW34 567 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 ENPP7Q6UWV6 458 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 SLC35D2Q76EJ3 337 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 PAQR7Q86WK9 346 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 CHSY1Q86X52 802 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 FBXO11Q86XK2 927 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 OR5T1Q8NG75 326 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 COQ8BQ96D53 544 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 FOXN4Q96NZ1 517 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 CYP2S1Q96SQ9 504 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 IL22Q9GZX6 179 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 DAPK2Q9UIK4 370 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 SLC25A13Q9UJS0 675 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 PITPNC1Q9UKF7 332 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 TSC22D4Q9Y3Q8 395 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 DUSP10Q9Y6W6 482 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 TOGARAM1Q9Y4F4 1720 aa5.9□□□□□ -1.46
TRAPPC11-209ENST00000512476 GLI3P10071 1580 aa5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 ERVV-2B6SEH9 535 aa5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 NBR2O15453 112 aa5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 FABP1P07148 127 aa5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 RAB40ALP0C0E4 278 aa5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 ZNF7P17097 686 aaPredicted RBP5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 EIF2S2P20042 333 aaKnown RBP5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 CCNOP22674 350 aa5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 MSNP26038 577 aaKnown RBP5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 TACR3P29371 465 aa5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 MAGEA9P43362 315 aa5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 FHITP49789 147 aa5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 NUP107P57740 925 aa5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 MVKQ03426 396 aa5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 ARHGAP1Q07960 439 aa5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 CCNIQ14094 377 aa5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 CAPRIN1Q14444 709 aaKnown RBP5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 NR1I3Q14994 352 aa5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 FASTKD3Q14CZ7 662 aaKnown RBP5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 RPE65Q16518 533 aa5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 CPSF6Q16630 551 aaKnown RBP eCLIP5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 ZNF691Q5VV52 312 aa5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 RHBDF2Q6PJF5 856 aa5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 PLXDC2Q6UX71 529 aa5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 DMRTC2Q8IXT2 367 aaPredicted RBP5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 CLEC4FQ8N1N0 589 aa5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 MUC20Q8N307 709 aaPredicted RBP5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 KLHL36Q8N4N3 616 aa5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 MARVELD2Q8N4S9 558 aa5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 NUP43Q8NFH3 380 aa5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 TRMT10AQ8TBZ6 339 aaKnown RBP5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 AKR1E2Q96JD6 320 aa5.9□□□□□ -1.47
TRAPPC11-209ENST00000512476 C1QTNF1Q9BXJ1 281 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms