RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 MSANTD1Q6ZTZ1 278 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 COMMD6Q7Z4G1 85 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 ACOT4Q8N9L9 421 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 KAT2AQ92830 837 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 METTL2AQ96IZ6 378 aaKnown RBP4.88□□□□□ -1.63
PHF3-210ENST00000509876 LINC00615Q96LM1 132 aaPredicted RBP4.88□□□□□ -1.63
PHF3-210ENST00000509876 NPLQ9BXD5 320 aaPredicted RBP4.88□□□□□ -1.63
PHF3-210ENST00000509876 SLC35C2Q9NQQ7 365 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 CUEDC1Q9NWM3 386 aaPredicted RBP4.88□□□□□ -1.63
PHF3-210ENST00000509876 OR51B4Q9Y5P0 310 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 RTCAO00442 366 aaKnown RBP4.88□□□□□ -1.63
PHF3-210ENST00000509876 FZD6O60353 706 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 OR1D4P47884 311 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 SSR4P51571 173 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 EEFSECP57772 596 aaKnown RBP4.88□□□□□ -1.63
PHF3-210ENST00000509876 UFM1P61960 85 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 CDK6Q00534 326 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 RFX4Q33E94 735 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 OAFQ86UD1 273 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 OR4N5Q8IXE1 308 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 GALNT6Q8NCL4 622 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 OR9A4Q8NGU2 314 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 NFKBIDQ8NI38 313 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 MS4A4EQ96PG1 132 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 EXOSC4Q9NPD3 245 aaKnown RBP4.88□□□□□ -1.63
PHF3-210ENST00000509876 FARSBQ9NSD9 589 aaKnown RBP4.88□□□□□ -1.63
PHF3-210ENST00000509876 C9JVG2 144 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 SLITRK5O94991 958 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 PDX1P52945 283 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 XIAPP98170 497 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 RUNX1T1Q06455 604 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 GALNT1Q10472 559 aaPredicted RBP4.88□□□□□ -1.63
PHF3-210ENST00000509876 SLC14A1Q13336 389 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 PTGES3Q15185 160 aaKnown RBP4.88□□□□□ -1.63
PHF3-210ENST00000509876 DENND5AQ6IQ26 1287 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 RPS27LQ71UM5 84 aaKnown RBP4.88□□□□□ -1.63
PHF3-210ENST00000509876 SVOPQ8N4V2 548 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 OR7G3Q8NG95 312 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 LKAAEAR1Q8TD35 194 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 ANKRD49Q8WVL7 239 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 GEMIN6Q8WXD5 167 aaKnown RBP4.88□□□□□ -1.63
PHF3-210ENST00000509876 DDIT4LQ96D03 193 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 CCNL2Q96S94 520 aaPredicted RBP4.88□□□□□ -1.63
PHF3-210ENST00000509876 NTMT1Q9BV86 223 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 DCLRE1BQ9H816 532 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 CLK4Q9HAZ1 481 aaKnown RBP4.88□□□□□ -1.63
PHF3-210ENST00000509876 SACM1LQ9NTJ5 587 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 NFKBIL1Q9UBC1 381 aaPredicted RBP4.88□□□□□ -1.63
PHF3-210ENST00000509876 POLHQ9Y253 713 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 TPRKBQ9Y3C4 175 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 MYOCOSA0A1B0GUC4 107 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 SLC5A10A0PJK1 596 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 NPIPA2E9PIF3 369 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 NPIPA3F8WFD2 350 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 PLD2O14939 933 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 MAN1A2O60476 641 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 ADAM23O75077 832 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 SERPINA1P01009 418 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 MYBPC1Q00872 1141 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 SF3A2Q15428 464 aaKnown RBP4.87□□□□□ -1.63
PHF3-210ENST00000509876 C6orf136Q5SQH8 315 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 CYP4V2Q6ZWL3 525 aaPredicted RBP4.87□□□□□ -1.63
PHF3-210ENST00000509876 LINC00471Q8N535 108 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 TEX19Q8NA77 164 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 OR4C6Q8NH72 309 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 PTERQ96BW5 349 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 CNBD2Q96M20 576 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 LRMDAQ9H2I8 198 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 TPT1P8Q9HAU6 139 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 ZBTB20Q9HC78 741 aaPredicted RBP4.87□□□□□ -1.63
PHF3-210ENST00000509876 USE1Q9NZ43 259 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 SERGEFQ9UGK8 458 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 EGFL7Q9UHF1 273 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 IKZF3Q9UKT9 509 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 PPIL1Q9Y3C6 166 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 A0A1B0GTQ1 180 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 KRBA1A5PL33 1030 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 GNB5O14775 395 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 CSTAP01040 98 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 PRG2P13727 222 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 DDCP20711 480 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 GSSP48637 474 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 RAPSNQ13702 412 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 CLCA4Q14CN2 919 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 ZNF528Q3MIS6 628 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 STPG1Q5TH74 334 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 TYW3Q6IPR3 259 aaKnown RBP4.87□□□□□ -1.63
PHF3-210ENST00000509876 ZNF786Q8N393 782 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 SH3YL1Q96HL8 342 aaPredicted RBP4.87□□□□□ -1.63
PHF3-210ENST00000509876 ZNF578Q96N58 590 aaPredicted RBP4.87□□□□□ -1.63
PHF3-210ENST00000509876 SH3GL3Q99963 347 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 ACTRT3Q9BYD9 372 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 OR51I1Q9H343 314 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 SMOC1Q9H4F8 434 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 CD93Q9NPY3 652 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 ACAD8Q9UKU7 415 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 ZNF891A8MT65 544 aaPredicted RBP4.87□□□□□ -1.63
PHF3-210ENST00000509876 FOXE1O00358 373 aaPredicted RBP4.87□□□□□ -1.63
PHF3-210ENST00000509876 ALOX12BO75342 701 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 NME6O75414 186 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms