RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 LRFN1Q9P244 771 aa7.42□□□□□ -1.22
UBE2D3-222ENST00000508238 SEC14L3Q9UDX4 400 aa7.42□□□□□ -1.22
UBE2D3-222ENST00000508238 FREM3P0C091 2139 aa7.42□□□□□ -1.22
UBE2D3-222ENST00000508238 ABCA4P78363 2273 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 TEP1Q99973 2627 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 F8W735 103 aaPredicted RBP7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 UBXN8O00124 270 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 NME2P1O60361 137 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 CCNT2O60583 730 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 UGDHO60701 494 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 SLC25A12O75746 678 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 MYO1DO94832 1006 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 ALX3O95076 343 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 UNC5CO95185 931 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 KLHL2O95198 593 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 MLYCDO95822 493 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 PF4P02776 101 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 ALDOAP04075 364 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 ATP5A1P25705 553 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 TPP2P29144 1249 aaPredicted RBP7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 EEF1DP29692 281 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 PHBP35232 272 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 PIK3CBP42338 1070 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 MAGEA12P43365 314 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 HNRNPFP52597 415 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 ALDH18A1P54886 795 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 KCNK10P57789 538 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 OC90Q02509 493 aaPredicted RBP7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 SLC13A2Q13183 592 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 BIKQ13323 160 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 PCBP2Q15366 365 aaKnown RBP eCLIP7.41□□□□□ -1.228e-8■■■□□ 15.4
UBE2D3-222ENST00000508238 ELAVL1Q15717 326 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 GLE1Q53GS7 698 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 EXOSC6Q5RKV6 272 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 DEPDC1Q5TB30 811 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 MROH9Q5TGP6 573 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 KHDRBS2Q5VWX1 349 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 LIPJQ5W064 366 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 GRHL2Q6ISB3 625 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 MED27Q6P2C8 311 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 MTFR2Q6P444 385 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 SIAH3Q8IW03 269 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 SLC34A3Q8N130 599 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 TMEM132CQ8N3T6 1108 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 ACOT4Q8N9L9 421 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 TMEM52Q8NDY8 209 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 KCTD4Q8WVF5 259 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 SLC44A1Q8WWI5 657 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 CCT6BQ92526 530 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 ISL2Q96A47 359 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 TRIM44Q96DX7 344 aaPredicted RBP7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 WDR89Q96FK6 387 aaPredicted RBP7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 CMTM7Q96FZ5 175 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 VMP1Q96GC9 406 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 ADAP2Q9NPF8 381 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 SNX15Q9NRS6 342 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 NINJ2Q9NZG7 142 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 OPTCQ9UBM4 332 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 MTRF1LQ9UGC7 380 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 ZNF835Q9Y2P0 537 aa7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 TNPO3Q9Y5L0 923 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 ANKHD1Q8IWZ3 2542 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-222ENST00000508238 A0A096LPK6 155 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 A0A0G2JN53 185 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 TRBV11-1A0A0K0K1C0 115 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 A1L4Q6 167 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 TMEM200CA6NKL6 621 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 SUPT3HB4E1H0 165 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 H0YIV9 168 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 FCHO1O14526 889 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 SLC19A2O60779 497 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 SUPT3HO75486 399 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 WISP2O76076 250 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 ZFAND5O76080 213 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 URI1O94763 535 aaPredicted RBP7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 COL6A2P12110 1019 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 HIST1H1TP22492 207 aaPredicted RBP7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 PTX3P26022 381 aaPredicted RBP7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 CERS1P27544 350 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 TYK2P29597 1187 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 CA7P43166 264 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 MSH2P43246 934 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 PIK3CGP48736 1102 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 SERPINB8P50452 374 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 IGLV3-21P80748 117 aaPredicted RBP7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 RBPJQ06330 500 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 SERTAD2Q14140 314 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 AP5B1Q2VPB7 878 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 HIST2H2BCQ6DN03 193 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 KLC3Q6P597 504 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 ZNF793Q6ZN11 406 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 Q6ZPB1 254 aaPredicted RBP7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 GALNTL5Q7Z4T8 443 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 GPALPP1Q8IXQ4 340 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 ZCCHC7Q8N3Z6 543 aaKnown RBP7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 TEX9Q8N6V9 391 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 L3MBTL4Q8NA19 623 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 POGLUT1Q8NBL1 392 aa7.4□□□□□ -1.22
UBE2D3-222ENST00000508238 FAM98AQ8NCA5 519 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms