RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ARHGEF33A8MVX0 844 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 TRAFD1O14545 582 aaPredicted RBP2.83□□□□□ -1.96
LSM6-205ENST00000507449 DCXO43602 365 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 OR6A2O95222 327 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 CXCL10P02778 98 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 ALPPP05187 535 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 ALPPL2P10696 532 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 CD1DP15813 335 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 PKLRP30613 574 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 FCGR2BP31994 310 aaPredicted RBP2.83□□□□□ -1.96
LSM6-205ENST00000507449 FCGR2CP31995 323 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 ID1P41134 155 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 NSFP46459 744 aaKnown RBP2.83□□□□□ -1.96
LSM6-205ENST00000507449 GEMP55040 296 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 FKBP3Q00688 224 aaKnown RBP2.83□□□□□ -1.96
LSM6-205ENST00000507449 SLC17A1Q14916 467 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 EXOSC7Q15024 291 aaKnown RBP2.83□□□□□ -1.96
LSM6-205ENST00000507449 PDK1Q15118 436 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 TAF1BQ53T94 588 aaPredicted RBP2.83□□□□□ -1.96
LSM6-205ENST00000507449 NKAIN2Q5VXU1 208 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 GSG1LQ6UXU4 331 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 MCM10Q7L590 875 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 ADGRD2Q7Z7M1 963 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 SLC22A16Q86VW1 577 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 FAM131BQ86XD5 332 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 OR6M1Q8NGM8 313 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 LRRC15Q8TF66 581 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 P3H4Q92791 437 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 CCDC47Q96A33 483 aaKnown RBP2.83□□□□□ -1.96
LSM6-205ENST00000507449 RAB39BQ96DA2 213 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 IWS1Q96ST2 819 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 SPXQ9BT56 116 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 TEX13AQ9BXU3 409 aaPredicted RBP2.83□□□□□ -1.96
LSM6-205ENST00000507449 SIRPDQ9H106 197 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 WDR41Q9HAD4 459 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 UBE2TQ9NPD8 197 aaPredicted RBP2.83□□□□□ -1.96
LSM6-205ENST00000507449 TSPAN16Q9UKR8 245 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 DNPEPQ9ULA0 475 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 MRPS2Q9Y399 296 aaKnown RBP2.83□□□□□ -1.96
LSM6-205ENST00000507449 SNED1Q8TER0 1413 aa2.83□□□□□ -1.96
LSM6-205ENST00000507449 A0A0U1RQG5 324 aaPredicted RBP2.82□□□□□ -1.96
LSM6-205ENST00000507449 LOC390937A0A1W2PQ73 354 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 TMEM89A2RUT3 159 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 FBP2O00757 339 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 KIAA0513O60268 411 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 ATP6V1G1O75348 118 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 SEC22BO75396 215 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 ANXA9O76027 345 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 REC8O95072 547 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 SFTPBP07988 381 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 ZCCHC18P0CG32 403 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 ACP1P24666 158 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 STIP1P31948 543 aaKnown RBP2.82□□□□□ -1.96
LSM6-205ENST00000507449 ETV5P41161 510 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 RABIFP47224 123 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 CCL11P51671 97 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 PRELPP51888 382 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 PEX3P56589 373 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 NLRP11P59045 1033 aaKnown RBP2.82□□□□□ -1.96
LSM6-205ENST00000507449 ERVK11-1P61568 191 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 CD300CQ08708 224 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 PPP1R8Q12972 351 aaKnown RBP2.82□□□□□ -1.96
LSM6-205ENST00000507449 P2RY14Q15391 338 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 MS4A18Q3C1V0 323 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 GPAT3Q53EU6 434 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 MPPE1Q53F39 396 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 PARP10Q53GL7 1025 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 HERC4Q5GLZ8 1057 aaPredicted RBP2.82□□□□□ -1.96
LSM6-205ENST00000507449 DOK6Q6PKX4 331 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 Q6ZRG5 221 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 TBC1D10CQ8IV04 446 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 Q8N377 158 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 CCNYQ8ND76 341 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 MAPK1IP1LQ8NDC0 245 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 CHDHQ8NE62 594 aaPredicted RBP2.82□□□□□ -1.96
LSM6-205ENST00000507449 GOLGA5Q8TBA6 731 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 SPPL2AQ8TCT8 520 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 CHPT1Q8WUD6 406 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 ESAMQ96AP7 390 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 TMEM186Q96B77 213 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 ZNF689Q96CS4 500 aaPredicted RBP2.82□□□□□ -1.96
LSM6-205ENST00000507449 AGAP3Q96P47 875 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 RCHY1Q96PM5 261 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 TAAR6Q96RI8 345 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 TNFRSF13CQ96RJ3 184 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 VGLL1Q99990 258 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 CABLES2Q9BTV7 478 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 XPO4Q9C0E2 1151 aaKnown RBP2.82□□□□□ -1.96
LSM6-205ENST00000507449 ABCG4Q9H172 646 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 TRPV6Q9H1D0 765 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 ABCG8Q9H221 673 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 TNMDQ9H2S6 317 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 NMUR1Q9HB89 426 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 SLC25A19Q9HC21 320 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 GDF3Q9NR23 364 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 NINJ2Q9NZG7 142 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 FAM153AQ9UHL3 310 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 ZNF346Q9UL40 294 aaKnown RBP2.82□□□□□ -1.96
LSM6-205ENST00000507449 NIP7Q9Y221 180 aaKnown RBP eCLIP2.82□□□□□ -1.96
LSM6-205ENST00000507449 KLHDC2Q9Y2U9 406 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms