RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 WWP1Q9H0M0 922 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 LIME1Q9H400 295 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 MARCH7Q9H992 704 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 DNAJC11Q9NVH1 559 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 MAD2L2Q9UI95 211 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 TEKT2Q9UIF3 430 aa3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 FOXA2Q9Y261 457 aaPredicted RBP3.22□□□□□ -1.89
TOPBP1-204ENST00000505804 CCER2I3L3R5 266 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 TXNL1O43396 289 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 KINO60870 393 aaKnown RBP3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 PRDM1O75626 825 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 SEMA4FO95754 770 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 IGHG1P01857 330 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 PPP2R1AP30153 589 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 STIP1P31948 543 aaKnown RBP3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 CASP3P42574 277 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 MTIF2P46199 727 aaKnown RBP3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 SLC1A6P48664 564 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 PDE7AQ13946 482 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 FASTKQ14296 549 aaKnown RBP3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 MEF2DQ14814 521 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 OR1C1Q15619 314 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 TMEM44Q2T9K0 475 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 DCAF12Q5T6F0 453 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 AGAP7PQ5VUJ5 663 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 EMBQ6PCB8 327 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 C17orf64Q86WR6 236 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 CCDC71Q8IV32 467 aaPredicted RBP3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 SERPINA12Q8IW75 414 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 STHQ8IWL8 128 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 FAM9BQ8IZU0 186 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 SIDT2Q8NBJ9 832 aaKnown RBP3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 OR4Q3Q8NH05 313 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 KRT35Q92764 455 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 TOMM40LQ969M1 308 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 ESAMQ96AP7 390 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 MRPL53Q96EL3 112 aaKnown RBP3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 RAB40CQ96S21 281 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 TSPYL1Q9H0U9 437 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 NT5DC2Q9H857 520 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 SP140LQ9H930 580 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 GDF3Q9NR23 364 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 ZCCHC3Q9NUD5 404 aaKnown RBP3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 DDX28Q9NUL7 540 aaKnown RBP3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 TECRQ9NZ01 308 aaKnown RBP3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 RARRES3Q9UL19 164 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 MGAT4AQ9UM21 535 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 FBXO7Q9Y3I1 522 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 SNX5Q9Y5X3 404 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 FER1L5A0AVI2 2057 aa3.21□□□□□ -1.9
TOPBP1-204ENST00000505804 TEX48A0A1B0GUV7 120 aa3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 PHF1O43189 567 aaPredicted RBP3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 CSDE1O75534 798 aaKnown RBP3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 ANXA9O76027 345 aa3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 TXNDC12O95881 172 aa3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 TPBGLP0DKB5 382 aa3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 FOLR2P14207 255 aa3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 FERP16591 822 aa3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 OAS2P29728 719 aaKnown RBP3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 P2RY14Q15391 338 aa3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 LEMD1Q68G75 181 aa3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 REG3GQ6UW15 175 aa3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 NUFIP2Q7Z417 695 aaKnown RBP3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 CARNMT1Q8N4J0 409 aa3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 GVQW1Q8N7I0 195 aa3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 ZNF781Q8N8C0 355 aa3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 CSNK1G2-AS1Q8NCQ2 148 aa3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 FOXN4Q96NZ1 517 aa3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 HSD17B14Q9BPX1 270 aa3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 SLC26A1Q9H2B4 701 aa3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 MRTO4Q9UKD2 239 aaKnown RBP3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 MMP24Q9Y5R2 645 aa3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 CPQQ9Y646 472 aa3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 COL2A1P02458 1487 aaPredicted RBP3.2□□□□□ -1.9
TOPBP1-204ENST00000505804 KIF7Q2M1P5 1343 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 IGHV3-16A0A0C4DH30 117 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 DUSP11O75319 330 aaKnown RBP3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 FRAT2O75474 233 aaPredicted RBP3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 MT-ND1P03886 318 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 OR9G9P0C7N8 305 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 CT45A8P0DMV1 189 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 CT45A9P0DMV2 189 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 UGT1A6P19224 532 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 SPRP35270 261 aaPredicted RBP3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 HERV-K104P63124 156 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 ACTN3Q08043 901 aaPredicted RBP3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 NPRL3Q12980 569 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 MSLNQ13421 630 aaPredicted RBP3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 KRT31Q15323 416 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 TRADDQ15628 312 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 EPC2Q52LR7 807 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 CT45A2Q5DJT8 189 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 SNX32Q86XE0 403 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 LYG1Q8N1E2 194 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 ZNF713Q8N859 430 aaPredicted RBP3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 RTL3Q8N8U3 475 aaKnown RBP3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 RELL2Q8NC24 303 aaPredicted RBP3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 OR4A16Q8NH70 328 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 GOLGA5Q8TBA6 731 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms