RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 MBNL1Q9NR56 388 aaKnown RBP11.38□□□□□ -0.59
NUP54-202ENST00000502850 ACER3Q9NUN7 267 aa11.38□□□□□ -0.59
NUP54-202ENST00000502850 IMP3Q9NV31 184 aaKnown RBP11.38□□□□□ -0.59
NUP54-202ENST00000502850 PSORS1C1Q9UIG5 152 aa11.38□□□□□ -0.59
NUP54-202ENST00000502850 HCN2Q9UL51 889 aa11.38□□□□□ -0.59
NUP54-202ENST00000502850 DUSP12Q9UNI6 340 aa11.38□□□□□ -0.59
NUP54-202ENST00000502850 SH3GLB1Q9Y371 365 aa11.38□□□□□ -0.59
NUP54-202ENST00000502850 OR1A2Q9Y585 309 aa11.38□□□□□ -0.59
NUP54-202ENST00000502850 CFAP20Q9Y6A4 193 aaKnown RBP11.38□□□□□ -0.59
NUP54-202ENST00000502850 CLCA1A8K7I4 914 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 CLDN25C9JDP6 229 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 RTCAO00442 366 aaKnown RBP11.37□□□□□ -0.59
NUP54-202ENST00000502850 FAAHO00519 579 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 DNTTP04053 509 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 CDK1P06493 297 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 HOXC4P09017 264 aaPredicted RBP11.37□□□□□ -0.59
NUP54-202ENST00000502850 TFPTP0C1Z6 253 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 GDI1P31150 447 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 GPC1P35052 558 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 OR1E2P47887 323 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 MASP1P48740 699 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 CCT3P49368 545 aaKnown RBP11.37□□□□□ -0.59
NUP54-202ENST00000502850 TUBA1BP68363 451 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 HSPB3Q12988 150 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 SLC9A5Q14940 896 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 COL19A1Q14993 1142 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 SPCS2Q15005 226 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 UAP1L1Q3KQV9 507 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 TMEM184AQ6ZMB5 413 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 TUBA1AQ71U36 451 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 CCDC71Q8IV32 467 aaPredicted RBP11.37□□□□□ -0.59
NUP54-202ENST00000502850 DNAJC22Q8N4W6 341 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 HORMAD2Q8N7B1 307 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 LINC01555Q8NAE3 123 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 DRAXINQ8NBI3 349 aaPredicted RBP11.37□□□□□ -0.59
NUP54-202ENST00000502850 OR52J3Q8NH60 311 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 BBS10Q8TAM1 723 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 GANCQ8TET4 914 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 SLC38A5Q8WUX1 472 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 NR4A3Q92570 626 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 SLC38A4Q969I6 547 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 EXOSC8Q96B26 276 aaKnown RBP11.37□□□□□ -0.59
NUP54-202ENST00000502850 CRELD1Q96HD1 420 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 TMEM19Q96HH6 336 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 PLEKHA8Q96JA3 519 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 ZNF354BQ96LW1 612 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 ALPK1Q96QP1 1244 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 CSF3RQ99062 836 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 MYOCQ99972 504 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 SARGQ9BW04 601 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 BTBD1Q9H0C5 482 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 TM7SF3Q9NS93 570 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 GIMAP4Q9NUV9 329 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 FKBP14Q9NWM8 211 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 CNOT2Q9NZN8 540 aaKnown RBP11.37□□□□□ -0.59
NUP54-202ENST00000502850 MGAT4BQ9UQ53 548 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 COLEC10Q9Y6Z7 277 aa11.37□□□□□ -0.59
NUP54-202ENST00000502850 FEZF1A0PJY2 475 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 LRIT2A6NDA9 550 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 EFCAB10A6NFE3 127 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 PDZK1P1A8MUH7 402 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 TMX2-CTNND1H3BSU7 103 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 MFN2O95140 757 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 TNFRSF1BP20333 461 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 PSMB5P28074 263 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 EPHA2P29317 976 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 CMPK1P30085 196 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 CD6P30203 668 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 MAP2K4P45985 399 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 IDH2P48735 452 aaKnown RBP11.36□□□□□ -0.59
NUP54-202ENST00000502850 CASP9P55211 416 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 AQP6Q13520 282 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 ZIC1Q15915 447 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 PRSS53Q2L4Q9 553 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 ADPRMQ3LIE5 342 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 PUS10Q3MIT2 529 aaKnown RBP11.36□□□□□ -0.59
NUP54-202ENST00000502850 PRAMEF8Q5VWM4 474 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 PRAMEF7Q5VXH5 474 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 LAIR1Q6GTX8 287 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 PTCRAQ6ISU1 281 aaPredicted RBP11.36□□□□□ -0.59
NUP54-202ENST00000502850 DUS1LQ6P1R4 473 aaKnown RBP11.36□□□□□ -0.59
NUP54-202ENST00000502850 TNFAIP8L2Q6P589 184 aaPredicted RBP11.36□□□□□ -0.59
NUP54-202ENST00000502850 Q6ZNX1 250 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 ADCK1Q86TW2 530 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 SLCO6A1Q86UG4 719 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 STX19Q8N4C7 294 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 SMYD1Q8NB12 490 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 AQP11Q8NBQ7 271 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 OR56A1Q8NGH5 318 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 OR2A1Q8NGT9 310 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 UTP15Q8TED0 518 aaKnown RBP11.36□□□□□ -0.59
NUP54-202ENST00000502850 CREB3L4Q8TEY5 395 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 TANKQ92844 425 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 DNASE1L2Q92874 299 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 Q96MT0 163 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 COL21A1Q96P44 957 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 DPH7Q9BTV6 452 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 TRMT61BQ9BVS5 477 aaKnown RBP11.36□□□□□ -0.59
NUP54-202ENST00000502850 SLC17A9Q9BYT1 436 aa11.36□□□□□ -0.59
NUP54-202ENST00000502850 KIR3DX1Q9H7L2 352 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms