RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 TPP2P29144 1249 aaPredicted RBP11.94□□□□□ -0.5
HSPG2-213ENST00000498495 DEKP35659 375 aaKnown RBP11.94□□□□□ -0.5
HSPG2-213ENST00000498495 CD96P40200 585 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 ST13P50502 369 aaKnown RBP11.94□□□□□ -0.5
HSPG2-213ENST00000498495 GPR143P51810 404 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 MAPK12P53778 367 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 FOLH1Q04609 750 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 CSTF3Q12996 717 aaKnown RBP11.94□□□□□ -0.5
HSPG2-213ENST00000498495 TUBA3CQ13748 450 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 FAM219BQ5XKK7 198 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 TUBA3EQ6PEY2 450 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 GBP7Q8N8V2 638 aaPredicted RBP11.94□□□□□ -0.5
HSPG2-213ENST00000498495 GALNT11Q8NCW6 608 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 TCP10LQ8TDR4 215 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 THAP3Q8WTV1 239 aaPredicted RBP11.94□□□□□ -0.5
HSPG2-213ENST00000498495 PTPMT1Q8WUK0 201 aaPredicted RBP11.94□□□□□ -0.5
HSPG2-213ENST00000498495 PPWD1Q96BP3 646 aaKnown RBP11.94□□□□□ -0.5
HSPG2-213ENST00000498495 FAM111AQ96PZ2 611 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 KCNA7Q96RP8 456 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 OR8D2Q9GZM6 311 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 CLMPQ9H6B4 373 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 MKS1Q9NXB0 559 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 ANKRD10Q9NXR5 420 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 BOD1L1Q8NFC6 3051 aa11.94□□□□□ -0.5
HSPG2-213ENST00000498495 FCHO1O14526 889 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 PGRMC2O15173 223 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 PRAMEF2O60811 474 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 AIFM1O95831 613 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 CD46P15529 392 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 CHN1P15882 459 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 ALOX15P16050 662 aaPredicted RBP11.93□□□□□ -0.5
HSPG2-213ENST00000498495 PIK3R1P27986 724 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 STT3AP46977 705 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 CYB561P49447 251 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 MLF1P58340 268 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 IGLV3-21P80748 117 aaPredicted RBP11.93□□□□□ -0.5
HSPG2-213ENST00000498495 PLIN5Q00G26 463 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 BTKQ06187 659 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 ZNF844Q08AG5 666 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 GALNT1Q10472 559 aaPredicted RBP11.93□□□□□ -0.5
HSPG2-213ENST00000498495 TBL3Q12788 808 aaKnown RBP11.93□□□□□ -0.5
HSPG2-213ENST00000498495 PCLAFQ15004 111 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 SPINK14Q6IE38 97 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 SCIMPQ6UWF3 145 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 HSDL2Q6YN16 418 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 FRMD7Q6ZUT3 714 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 COMMD6Q7Z4G1 85 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 CROCCP2Q86T23 111 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 ST13P4Q8IZP2 240 aaPredicted RBP11.93□□□□□ -0.5
HSPG2-213ENST00000498495 C1orf52Q8N6N3 182 aaKnown RBP11.93□□□□□ -0.5
HSPG2-213ENST00000498495 HORMAD2Q8N7B1 307 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 CHTF18Q8WVB6 975 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 UCN3Q969E3 161 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 PELOQ9BRX2 385 aaKnown RBP11.93□□□□□ -0.5
HSPG2-213ENST00000498495 GATA5Q9BWX5 397 aaPredicted RBP11.93□□□□□ -0.5
HSPG2-213ENST00000498495 CENPHQ9H3R5 247 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 SENP1Q9P0U3 644 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 LRFN1Q9P244 771 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 SLC17A7Q9P2U7 560 aa11.93□□□□□ -0.5
HSPG2-213ENST00000498495 TLN1Q9Y490 2541 aaKnown RBP11.93□□□□□ -0.5
HSPG2-213ENST00000498495 C1orf226A1L170 272 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 SERTM1A2A2V5 107 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 TCP11X1B4DZS4 312 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 CTIFO43310 598 aaKnown RBP11.92□□□□□ -0.5
HSPG2-213ENST00000498495 OR10H2O60403 315 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 ERLIN1O75477 346 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 RASAL1O95294 804 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 CREB1P16220 341 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 SERPINB3P29508 390 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 ALDH3A1P30838 453 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 HTR6P50406 440 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 FOXA1P55317 472 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 TRA2BP62995 288 aaKnown RBP11.92□□□□□ -0.5
HSPG2-213ENST00000498495 HMGCS1Q01581 520 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 OR1C1Q15619 314 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 IMPG1Q17R60 797 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 ZNF766Q5HY98 468 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 SPDYAQ5MJ70 313 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 CEP85LQ5SZL2 805 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 NDUFAF5Q5TEU4 345 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 OR52E8Q6IFG1 317 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 FAM180AQ6UWF9 173 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 TMEM156Q8N614 296 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 OR4K14Q8NGD5 310 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 OR5L2Q8NGL0 311 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 SLC2A12Q8TD20 617 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 GRHL3Q8TE85 626 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 FAR1Q8WVX9 515 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 SREK1Q8WXA9 508 aaKnown RBP11.92□□□□□ -0.5
HSPG2-213ENST00000498495 RIT1Q92963 219 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 TM4SF18Q96CE8 201 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 SENP5Q96HI0 755 aaPredicted RBP11.92□□□□□ -0.5
HSPG2-213ENST00000498495 ZIM3Q96PE6 472 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 SIGLEC12Q96PQ1 595 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 ACPTQ9BZG2 426 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 SHCBP1LQ9BZQ2 653 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 TEX10Q9NXF1 929 aaPredicted RBP11.92□□□□□ -0.5
HSPG2-213ENST00000498495 COPS7AQ9UBW8 275 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 ZNF223Q9UK11 482 aaPredicted RBP11.92□□□□□ -0.5
HSPG2-213ENST00000498495 PSME2Q9UL46 239 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms