RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 CNPY4Q8N129 248 aa17.11■□□□□ 0.33
HOXD11-202ENST00000498438 TMEM156Q8N614 296 aa17.11■□□□□ 0.33
HOXD11-202ENST00000498438 TRPC4APQ8TEL6 797 aa17.11■□□□□ 0.33
HOXD11-202ENST00000498438 TANKQ92844 425 aa17.11■□□□□ 0.33
HOXD11-202ENST00000498438 TMEM125Q96AQ2 219 aa17.11■□□□□ 0.33
HOXD11-202ENST00000498438 FRMD6Q96NE9 622 aa17.11■□□□□ 0.33
HOXD11-202ENST00000498438 DGAT2Q96PD7 388 aa17.11■□□□□ 0.33
HOXD11-202ENST00000498438 LIN28AQ9H9Z2 209 aaKnown RBP17.11■□□□□ 0.33
HOXD11-202ENST00000498438 FARSBQ9NSD9 589 aaKnown RBP17.11■□□□□ 0.33
HOXD11-202ENST00000498438 ZNF225Q9UK10 706 aa17.11■□□□□ 0.33
HOXD11-202ENST00000498438 NBPF19A0A087WUL8 3843 aa17.11■□□□□ 0.33
HOXD11-202ENST00000498438 A0A1W2PR48 441 aa17.1■□□□□ 0.33
HOXD11-202ENST00000498438 GLOD5A6NK44 160 aa17.1■□□□□ 0.33
HOXD11-202ENST00000498438 TMEM200CA6NKL6 621 aa17.1■□□□□ 0.33
HOXD11-202ENST00000498438 CYSRT1A8MQ03 144 aa17.1■□□□□ 0.33
HOXD11-202ENST00000498438 FOXO6A8MYZ6 492 aa17.1■□□□□ 0.33
HOXD11-202ENST00000498438 OR2J2O76002 312 aa17.1■□□□□ 0.33
HOXD11-202ENST00000498438 WISP2O76076 250 aa17.1■□□□□ 0.33
HOXD11-202ENST00000498438 UNC5CO95185 931 aa17.1■□□□□ 0.33
HOXD11-202ENST00000498438 AIFM1O95831 613 aa17.1■□□□□ 0.33
HOXD11-202ENST00000498438 GSTA1P08263 222 aa17.1■□□□□ 0.33
HOXD11-202ENST00000498438 ATP5F1P24539 256 aaPredicted RBP17.1■□□□□ 0.33
HOXD11-202ENST00000498438 HSD17B3P37058 310 aa17.1■□□□□ 0.33
HOXD11-202ENST00000498438 SLCO1A2P46721 670 aa17.1■□□□□ 0.33
HOXD11-202ENST00000498438 SSR4P51571 173 aa17.1■□□□□ 0.33
HOXD11-202ENST00000498438 PLIN5Q00G26 463 aa17.1■□□□□ 0.33
HOXD11-202ENST00000498438 CLCQ05315 142 aa17.1■□□□□ 0.33
HOXD11-202ENST00000498438 UNC50Q53HI1 259 aa17.1■□□□□ 0.33
HOXD11-202ENST00000498438 ZNF678Q5SXM1 525 aa17.1■□□□□ 0.33
HOXD11-202ENST00000498438 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.1■□□□□ 0.33
HOXD11-202ENST00000498438 CYP4Z2PQ8N1L4 340 aa17.1■□□□□ 0.33
HOXD11-202ENST00000498438 FAM98AQ8NCA5 519 aaKnown RBP17.1■□□□□ 0.33
HOXD11-202ENST00000498438 MRPL1Q9BYD6 325 aaKnown RBP17.1■□□□□ 0.33
HOXD11-202ENST00000498438 ANKZF1Q9H8Y5 726 aa17.1■□□□□ 0.33
HOXD11-202ENST00000498438 SEC14L3Q9UDX4 400 aa17.1■□□□□ 0.33
HOXD11-202ENST00000498438 TRPS1Q9UHF7 1281 aa17.1■□□□□ 0.33
HOXD11-202ENST00000498438 YARS2Q9Y2Z4 477 aaKnown RBP17.1■□□□□ 0.33
HOXD11-202ENST00000498438 A0A1W2PPM1 405 aa17.09■□□□□ 0.33
HOXD11-202ENST00000498438 WIPF3A6NGB9 483 aa17.09■□□□□ 0.33
HOXD11-202ENST00000498438 SMIM23A6NLE4 172 aa17.09■□□□□ 0.33
HOXD11-202ENST00000498438 LRRTM2O43300 516 aa17.09■□□□□ 0.33
HOXD11-202ENST00000498438 SUPT7LO94864 414 aa17.09■□□□□ 0.33
HOXD11-202ENST00000498438 OR4F21O95013 312 aa17.09■□□□□ 0.33
HOXD11-202ENST00000498438 PDYNP01213 254 aa17.09■□□□□ 0.33
HOXD11-202ENST00000498438 STSP08842 583 aa17.09■□□□□ 0.33
HOXD11-202ENST00000498438 ALOX15P16050 662 aaPredicted RBP17.09■□□□□ 0.33
HOXD11-202ENST00000498438 ALDH6A1Q02252 535 aaKnown RBP17.09■□□□□ 0.33
HOXD11-202ENST00000498438 DGAT2L6Q6ZPD8 337 aa17.09■□□□□ 0.33
HOXD11-202ENST00000498438 SLC22A9Q8IVM8 553 aa17.09■□□□□ 0.33
HOXD11-202ENST00000498438 CPSF7Q8N684 471 aaKnown RBP17.09■□□□□ 0.33
HOXD11-202ENST00000498438 C7orf57Q8NEG2 295 aa17.09■□□□□ 0.33
HOXD11-202ENST00000498438 MYRIPQ8NFW9 859 aa17.09■□□□□ 0.33
HOXD11-202ENST00000498438 ZNF721Q8TF20 911 aa17.09■□□□□ 0.33
HOXD11-202ENST00000498438 SELENOMQ8WWX9 145 aa17.09■□□□□ 0.33
HOXD11-202ENST00000498438 PPWD1Q96BP3 646 aaKnown RBP17.09■□□□□ 0.33
HOXD11-202ENST00000498438 TSPAN10Q9H1Z9 355 aaPredicted RBP17.09■□□□□ 0.33
HOXD11-202ENST00000498438 WDR41Q9HAD4 459 aa17.09■□□□□ 0.33
HOXD11-202ENST00000498438 TEX10Q9NXF1 929 aaPredicted RBP17.09■□□□□ 0.33
HOXD11-202ENST00000498438 MYOTQ9UBF9 498 aa17.09■□□□□ 0.33
HOXD11-202ENST00000498438 COPS7AQ9UBW8 275 aa17.09■□□□□ 0.33
HOXD11-202ENST00000498438 SNX6Q9UNH7 406 aa17.09■□□□□ 0.33
HOXD11-202ENST00000498438 SLC12A4Q9UP95 1085 aa17.09■□□□□ 0.33
HOXD11-202ENST00000498438 A1L4Q6 167 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 WASHC1A8K0Z3 465 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 WWP2O00308 870 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 GPR75O95800 540 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 KLK1P06870 262 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 IMPDH1P20839 514 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 HK2P52789 917 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 PRKAA2P54646 552 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 RNF4P78317 190 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 BIKQ13323 160 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 RASA2Q15283 850 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 TCHHL1Q5QJ38 904 aaPredicted RBP17.08■□□□□ 0.32
HOXD11-202ENST00000498438 C1QL3Q5VWW1 255 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 PAGE2Q7Z2X7 111 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 ST13P4Q8IZP2 240 aaPredicted RBP17.08■□□□□ 0.32
HOXD11-202ENST00000498438 METTL4Q8N3J2 472 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 CDYL2Q8N8U2 506 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 OR8K3Q8NH51 312 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 EPS8L3Q8TE67 593 aaKnown RBP17.08■□□□□ 0.32
HOXD11-202ENST00000498438 ASB15Q8WXK1 588 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.08■□□□□ 0.32
HOXD11-202ENST00000498438 UCN3Q969E3 161 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 RBM18Q96H35 190 aaKnown RBP17.08■□□□□ 0.32
HOXD11-202ENST00000498438 ZNF382Q96SR6 550 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 HBEGFQ99075 208 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 PPCSQ9HAB8 311 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 AHSPQ9NZD4 102 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 PLEKHB1Q9UF11 243 aaPredicted RBP17.08■□□□□ 0.32
HOXD11-202ENST00000498438 DCDC2Q9UHG0 476 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 ADAM29Q9UKF5 820 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 EMCNQ9ULC0 261 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 KLF13Q9Y2Y9 288 aaPredicted RBP17.08■□□□□ 0.32
HOXD11-202ENST00000498438 MAST4O15021 2626 aa17.08■□□□□ 0.32
HOXD11-202ENST00000498438 NAV2Q8IVL1 2488 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 A8MVJ9 347 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 HRKO00198 91 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 DYRK3O43781 588 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 GLRA3O75311 464 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms