RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 YJEFN3A6XGL0 299 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 SRRM4A7MD48 611 aaKnown RBP3.39□□□□□ -1.87
SMC4-225ENST00000497203 A8MU76 341 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 TMCO5BA8MYB1 307 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 ANHXE9PGG2 379 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 ARPC1BO15143 372 aaKnown RBP3.39□□□□□ -1.87
SMC4-225ENST00000497203 REC8O95072 547 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 NXPH4O95158 308 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 PTMAP06454 111 aaKnown RBP3.39□□□□□ -1.87
SMC4-225ENST00000497203 HIST1H2AGP0C0S8 130 aaPredicted RBP3.39□□□□□ -1.87
SMC4-225ENST00000497203 ARF4P18085 180 aaPredicted RBP3.39□□□□□ -1.87
SMC4-225ENST00000497203 GPX3P22352 226 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 PPP2R1AP30153 589 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 TNFRSF4P43489 277 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 ASMTP46597 345 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 ZFP36L2P47974 494 aaKnown RBP3.39□□□□□ -1.87
SMC4-225ENST00000497203 PITPNBP48739 271 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 ATXN3P54252 364 aaPredicted RBP3.39□□□□□ -1.87
SMC4-225ENST00000497203 IL1RL1Q01638 556 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 UPP1Q16831 310 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 MOGAT2Q3SYC2 334 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 ZNF730Q6ZMV8 503 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 ZFAND4Q86XD8 727 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.39□□□□□ -1.87
SMC4-225ENST00000497203 TBC1D10CQ8IV04 446 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 OR4N5Q8IXE1 308 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 GVQW1Q8N7I0 195 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 COLGALT1Q8NBJ5 622 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 OR52E1Q8NGJ3 308 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 SPPL2AQ8TCT8 520 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 HIST1H2ACQ93077 130 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 CXorf58Q96LI9 332 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 AGAP4Q96P64 663 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 FAM111AQ96PZ2 611 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 ALKBH3Q96Q83 286 aaPredicted RBP3.39□□□□□ -1.87
SMC4-225ENST00000497203 RAB40CQ96S21 281 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 TRIM51Q9BSJ1 452 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 ZNF577Q9BSK1 485 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 MCRIP2Q9BUT9 160 aaKnown RBP3.39□□□□□ -1.87
SMC4-225ENST00000497203 FTHL17Q9BXU8 183 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 UPF3AQ9H1J1 476 aaKnown RBP3.39□□□□□ -1.87
SMC4-225ENST00000497203 GDF3Q9NR23 364 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 TECRQ9NZ01 308 aaKnown RBP3.39□□□□□ -1.87
SMC4-225ENST00000497203 ERVK-18Q9QC07 812 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 COPS7AQ9UBW8 275 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 FAM153AQ9UHL3 310 aa3.39□□□□□ -1.87
SMC4-225ENST00000497203 MTF2Q9Y483 593 aaPredicted RBP3.39□□□□□ -1.87
SMC4-225ENST00000497203 IGHV3-20A0A0C4DH32 117 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 OR5H15A6NDH6 313 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 GLTPD2A6NH11 291 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 SHISA7A6NL88 538 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.38□□□□□ -1.87
SMC4-225ENST00000497203 RASGRF2O14827 1237 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 STAM2O75886 525 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 MT-ATP6P00846 226 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 ZSCAN5DPP0CG00 497 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 MBL2P11226 248 aaPredicted RBP3.38□□□□□ -1.87
SMC4-225ENST00000497203 KRT5P13647 590 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 ETS1P14921 441 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 ACADSBP45954 432 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 RIGQ13278 110 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 MLF2Q15773 248 aaPredicted RBP3.38□□□□□ -1.87
SMC4-225ENST00000497203 WSCD2Q2TBF2 565 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 MS4A18Q3C1V0 323 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 GPAT3Q53EU6 434 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 FASTKD1Q53R41 847 aaKnown RBP3.38□□□□□ -1.87
SMC4-225ENST00000497203 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 FAAP20Q6NZ36 180 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 Q6ZRG5 221 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 RBM43Q6ZSC3 357 aaKnown RBP3.38□□□□□ -1.87
SMC4-225ENST00000497203 C1orf186Q6ZWK4 172 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 MRPL53Q96EL3 112 aaKnown RBP3.38□□□□□ -1.87
SMC4-225ENST00000497203 C14orf79Q96F83 325 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 ATXN7L3BQ96GX2 97 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 PCED1BQ96HM7 432 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 LINC00479Q96M42 142 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 KCNK16Q96T55 309 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 COQ7Q99807 217 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 NACA2Q9H009 215 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 HSD3B7Q9H2F3 369 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 NINJ2Q9NZG7 142 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 NDUFA13Q9P0J0 144 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 SPASTQ9UBP0 616 aa3.38□□□□□ -1.87
SMC4-225ENST00000497203 DIMT1Q9UNQ2 313 aaKnown RBP3.38□□□□□ -1.87
SMC4-225ENST00000497203 CSO75390 466 aaKnown RBP3.37□□□□□ -1.87
SMC4-225ENST00000497203 ANXA9O76027 345 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 SYNGR4O95473 234 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 DUS4LO95620 317 aaKnown RBP3.37□□□□□ -1.87
SMC4-225ENST00000497203 PTMSP20962 102 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 UGT1A4P22310 534 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 LIMK2P53671 638 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 BPIFB3P59826 476 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 ERVK11-1P61568 191 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 CALCOCO2Q13137 446 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 NME3Q13232 169 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 EXOSC7Q15024 291 aaKnown RBP3.37□□□□□ -1.87
SMC4-225ENST00000497203 NECTIN1Q15223 517 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 FCN2Q15485 313 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 ECSCRQ19T08 205 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 OR6B2Q6IFH4 312 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms