RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 UBXN7O94888 489 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 DKK1O94907 266 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 NTRK1P04629 796 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 CAPNS1P04632 268 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 RPSAP08865 295 aaKnown RBP9.72□□□□□ -0.85
HDAC3-214ENST00000495485 GIMD1P0DJR0 217 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 MAGP20916 626 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 CDH3P22223 829 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 PEX2P28328 305 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 PCGF2P35227 344 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 SOAT1P35610 550 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 FRKP42685 505 aaPredicted RBP9.72□□□□□ -0.85
HDAC3-214ENST00000495485 GZMMP51124 257 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 CLCN2P51788 898 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 HBA1P69905 142 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 BTN3A2P78410 334 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 MC1RQ01726 317 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 MYBPC3Q14896 1274 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 ATP6AP1Q15904 470 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 GTDC1Q4AE62 458 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 C14orf28Q4W4Y0 310 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 GCNT6Q5T4J0 391 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 NDUFAF5Q5TEU4 345 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 ANKRD26P1Q6NSI1 321 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 GATAD2AQ86YP4 633 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 GALNT15Q8N3T1 639 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 SVOPLQ8N434 492 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 METTL25Q8N6Q8 603 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 OR2I1PQ8NGU4 316 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 NUDT8Q8WV74 236 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 JPH3Q8WXH2 748 aaPredicted RBP9.72□□□□□ -0.85
HDAC3-214ENST00000495485 SLCO4A1Q96BD0 722 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 SLC47A1Q96FL8 570 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 AHCYL2Q96HN2 611 aaKnown RBP9.72□□□□□ -0.85
HDAC3-214ENST00000495485 PYURFQ96I23 114 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 SEPHS2Q99611 448 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 CHID1Q9BWS9 393 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 OSBPL10Q9BXB5 764 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 ZNF717Q9BY31 904 aaPredicted RBP9.72□□□□□ -0.85
HDAC3-214ENST00000495485 TRIM8Q9BZR9 551 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 TCEAL2Q9H3H9 227 aaPredicted RBP9.72□□□□□ -0.85
HDAC3-214ENST00000495485 SEMA6CQ9H3T2 930 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 TMEM38AQ9H6F2 299 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 RPF2Q9H7B2 306 aaKnown RBP9.72□□□□□ -0.85
HDAC3-214ENST00000495485 PRDM7Q9NQW5 492 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 AGPAT4Q9NRZ5 378 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 C1GALT1Q9NS00 363 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 UCKL1Q9NWZ5 548 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 ANGPT4Q9Y264 503 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 ZNF451Q9Y4E5 1061 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 ZNF780BQ9Y6R6 833 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 MDC1Q14676 2089 aaKnown RBP9.71□□□□□ -0.85
HDAC3-214ENST00000495485 ANKRD11Q6UB99 2663 aaPredicted RBP9.71□□□□□ -0.85
HDAC3-214ENST00000495485 A0A0J9YVX5 310 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 BLACEA4D250 179 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 MAGEA13PA6NCF6 341 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 C5orf58C9J3I9 102 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 RTCAO00442 366 aaKnown RBP9.71□□□□□ -0.86
HDAC3-214ENST00000495485 RFPL3O75679 317 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 PDE9AO76083 593 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 SERPINA1P01009 418 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 PROS1P07225 676 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 CSNK2A2P19784 350 aaPredicted RBP9.71□□□□□ -0.86
HDAC3-214ENST00000495485 CPN2P22792 545 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 KDELR2P33947 212 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 YBX1P67809 324 aaKnown RBP9.71□□□□□ -0.86
HDAC3-214ENST00000495485 GPLD1P80108 840 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 EPS8Q12929 822 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 NR1D2Q14995 579 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 DEFB133Q30KQ1 61 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.71□□□□□ -0.86
HDAC3-214ENST00000495485 ZNF385BQ569K4 471 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.71□□□□□ -0.86
HDAC3-214ENST00000495485 MRM1Q6IN84 353 aaKnown RBP9.71□□□□□ -0.86
HDAC3-214ENST00000495485 PPP4R4Q6NUP7 873 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 FBXO42Q6P3S6 717 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 RNF111Q6ZNA4 994 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 RNF44Q7L0R7 432 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 EIF3MQ7L2H7 374 aaKnown RBP9.71□□□□□ -0.86
HDAC3-214ENST00000495485 DGLUCYQ7Z3D6 616 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 UBE3DQ7Z6J8 389 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 LILRA2Q8N149 483 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 ARL14Q8N4G2 192 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 C7orf57Q8NEG2 295 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 DEFB124Q8NES8 71 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 FBXO30Q8TB52 745 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 SFXN5Q8TD22 340 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 RASSF5Q8WWW0 418 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 N4BP2L2Q92802 583 aaPredicted RBP9.71□□□□□ -0.86
HDAC3-214ENST00000495485 EXOSC8Q96B26 276 aaKnown RBP9.71□□□□□ -0.86
HDAC3-214ENST00000495485 AURKBQ96GD4 344 aaPredicted RBP9.71□□□□□ -0.86
HDAC3-214ENST00000495485 ZDHHC12Q96GR4 267 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 TCTN2Q96GX1 697 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 TEFMQ96QE5 360 aaKnown RBP9.71□□□□□ -0.86
HDAC3-214ENST00000495485 OR2A5Q96R48 311 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 CD180Q99467 661 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 DPH2Q9BQC3 489 aaPredicted RBP9.71□□□□□ -0.86
HDAC3-214ENST00000495485 OSBPL11Q9BXB4 747 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 NPLQ9BXD5 320 aaPredicted RBP9.71□□□□□ -0.86
HDAC3-214ENST00000495485 RAB33BQ9H082 229 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms