RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 DGAT2Q96PD7 388 aa20.41■□□□□ 0.86
HDDC3-203ENST00000494993 DPH5Q9H2P9 285 aa20.41■□□□□ 0.86
HDDC3-203ENST00000494993 ALG9Q9H6U8 611 aa20.41■□□□□ 0.86
HDDC3-203ENST00000494993 TUBA8Q9NY65 449 aaPredicted RBP20.41■□□□□ 0.86
HDDC3-203ENST00000494993 WHRNQ9P202 907 aa20.41■□□□□ 0.86
HDDC3-203ENST00000494993 TNFRSF10DQ9UBN6 386 aa20.41■□□□□ 0.86
HDDC3-203ENST00000494993 RNF14Q9UBS8 474 aa20.41■□□□□ 0.86
HDDC3-203ENST00000494993 ATG4BQ9Y4P1 393 aa20.41■□□□□ 0.86
HDDC3-203ENST00000494993 SAP18O00422 153 aaKnown RBP20.4■□□□□ 0.86
HDDC3-203ENST00000494993 AQP7O14520 342 aa20.4■□□□□ 0.86
HDDC3-203ENST00000494993 C1QAP02745 245 aa20.4■□□□□ 0.86
HDDC3-203ENST00000494993 HOXD4P09016 255 aaPredicted RBP20.4■□□□□ 0.86
HDDC3-203ENST00000494993 SPRP35270 261 aaPredicted RBP20.4■□□□□ 0.86
HDDC3-203ENST00000494993 PCDH1Q08174 1060 aa20.4■□□□□ 0.86
HDDC3-203ENST00000494993 ASPHQ12797 758 aa20.4■□□□□ 0.86
HDDC3-203ENST00000494993 DLG1Q12959 904 aa20.4■□□□□ 0.86
HDDC3-203ENST00000494993 KHDRBS2Q5VWX1 349 aaKnown RBP20.4■□□□□ 0.86
HDDC3-203ENST00000494993 B3GNT6Q6ZMB0 384 aa20.4■□□□□ 0.86
HDDC3-203ENST00000494993 C3orf62Q6ZUJ4 267 aa20.4■□□□□ 0.86
HDDC3-203ENST00000494993 OR4N5Q8IXE1 308 aa20.4■□□□□ 0.86
HDDC3-203ENST00000494993 OR7G3Q8NG95 312 aa20.4■□□□□ 0.86
HDDC3-203ENST00000494993 OR10Q1Q8NGQ4 319 aa20.4■□□□□ 0.86
HDDC3-203ENST00000494993 NUBPLQ8TB37 319 aa20.4■□□□□ 0.86
HDDC3-203ENST00000494993 UBTD2Q8WUN7 234 aa20.4■□□□□ 0.86
HDDC3-203ENST00000494993 CMTM7Q96FZ5 175 aa20.4■□□□□ 0.86
HDDC3-203ENST00000494993 SENP5Q96HI0 755 aaPredicted RBP20.4■□□□□ 0.86
HDDC3-203ENST00000494993 ERP44Q9BS26 406 aa20.4■□□□□ 0.86
HDDC3-203ENST00000494993 TTYH2Q9BSA4 534 aa20.4■□□□□ 0.86
HDDC3-203ENST00000494993 SETD2Q9BYW2 2564 aaPredicted RBP20.4■□□□□ 0.86
HDDC3-203ENST00000494993 OPTCQ9UBM4 332 aa20.4■□□□□ 0.86
HDDC3-203ENST00000494993 KCNN3Q9UGI6 736 aa20.4■□□□□ 0.86
HDDC3-203ENST00000494993 FAM215AQ9Y5M1 114 aa20.4■□□□□ 0.86
HDDC3-203ENST00000494993 ATP6AP2A0A1C7CYW4 349 aa20.39■□□□□ 0.85
HDDC3-203ENST00000494993 FAM187AA6NFU0 413 aa20.39■□□□□ 0.85
HDDC3-203ENST00000494993 K7EPI3 171 aa20.39■□□□□ 0.85
HDDC3-203ENST00000494993 SUSD5O60279 629 aa20.39■□□□□ 0.85
HDDC3-203ENST00000494993 ATP6AP2O75787 350 aa20.39■□□□□ 0.85
HDDC3-203ENST00000494993 IGKV3-11P04433 115 aa20.39■□□□□ 0.85
HDDC3-203ENST00000494993 CELA3AP09093 270 aa20.39■□□□□ 0.85
HDDC3-203ENST00000494993 GSTA2P09210 222 aa20.39■□□□□ 0.85
HDDC3-203ENST00000494993 MAN2A2P49641 1150 aa20.39■□□□□ 0.85
HDDC3-203ENST00000494993 GPX6P59796 221 aa20.39■□□□□ 0.85
HDDC3-203ENST00000494993 DEPDC1Q5TB30 811 aa20.39■□□□□ 0.85
HDDC3-203ENST00000494993 GRTP1Q5TC63 336 aa20.39■□□□□ 0.85
HDDC3-203ENST00000494993 RTL6Q6ICC9 239 aa20.39■□□□□ 0.85
HDDC3-203ENST00000494993 OR4C11Q6IEV9 310 aa20.39■□□□□ 0.85
HDDC3-203ENST00000494993 CMC1Q7Z7K0 106 aa20.39■□□□□ 0.85
HDDC3-203ENST00000494993 ISCA2Q86U28 154 aa20.39■□□□□ 0.85
HDDC3-203ENST00000494993 CTAGE3PQ8IX95 158 aa20.39■□□□□ 0.85
HDDC3-203ENST00000494993 C9orf40Q8IXQ3 194 aa20.39■□□□□ 0.85
HDDC3-203ENST00000494993 ATOH8Q96SQ7 321 aa20.39■□□□□ 0.85
HDDC3-203ENST00000494993 ZNF559Q9BR84 538 aa20.39■□□□□ 0.85
HDDC3-203ENST00000494993 SORBS1Q9BX66 1292 aaKnown RBP20.39■□□□□ 0.85
HDDC3-203ENST00000494993 OR51B5Q9H339 312 aa20.39■□□□□ 0.85
HDDC3-203ENST00000494993 SEMA4BQ9NPR2 832 aaPredicted RBP20.39■□□□□ 0.85
HDDC3-203ENST00000494993 MS4A12Q9NXJ0 267 aa20.39■□□□□ 0.85
HDDC3-203ENST00000494993 EXPH5Q8NEV8 1989 aa20.39■□□□□ 0.85
HDDC3-203ENST00000494993 SUPT3HB4E1H0 165 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 UBXN8O00124 270 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 KLK8O60259 260 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 KERAO60938 352 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 SUPT3HO75486 399 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 SLC35E2BP0CK96 405 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 GLI4P10075 376 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 PIGAP37287 484 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 SLAMF1Q13291 335 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 BIKQ13323 160 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 SLC10A1Q14973 349 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 SLMAPQ14BN4 828 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 ZNF791Q3KP31 576 aaPredicted RBP20.38■□□□□ 0.85
HDDC3-203ENST00000494993 GRHL2Q6ISB3 625 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 RAPH1Q70E73 1250 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 RNF175Q8N4F7 328 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 SLC22A8Q8TCC7 542 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 SARAFQ96BY9 339 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 ART5Q96L15 291 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 LDAHQ9H6V9 325 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 RPF2Q9H7B2 306 aaKnown RBP20.38■□□□□ 0.85
HDDC3-203ENST00000494993 GRPEL1Q9HAV7 217 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 NMRAL1Q9HBL8 299 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 SH2D2AQ9NP31 389 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 GRHL1Q9NZI5 618 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 ADGRE2Q9UHX3 823 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 ACAD8Q9UKU7 415 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 ZFHX3Q15911 3703 aa20.38■□□□□ 0.85
HDDC3-203ENST00000494993 DYRK3O43781 588 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 WDR1O75083 606 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 FAM155BO75949 473 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 NADKO95544 446 aaPredicted RBP20.37■□□□□ 0.85
HDDC3-203ENST00000494993 ZFP36L2P47974 494 aaKnown RBP20.37■□□□□ 0.85
HDDC3-203ENST00000494993 RAP1GDS1P52306 607 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 PLIN5Q00G26 463 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 TNFRSF17Q02223 184 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 FOLH1Q04609 750 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 DDX39BQ13838 428 aaKnown RBP20.37■□□□□ 0.85
HDDC3-203ENST00000494993 KBTBD12Q3ZCT8 623 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 CES4AQ5XG92 561 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 SLC22A10Q63ZE4 541 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 ADGRD1Q6QNK2 874 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 LYPD8Q6UX82 237 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms