RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 ADNP2Q6IQ32 1131 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 ARHGAP11AQ6P4F7 1023 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 MILR1Q7Z6M3 343 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 L3MBTL4Q8NA19 623 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 PSD4Q8NDX1 1056 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 TMEM52Q8NDY8 209 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 SLC2A12Q8TD20 617 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 ACMSDQ8TDX5 336 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 PTPMT1Q8WUK0 201 aaPredicted RBP15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 DCAKDQ8WVC6 231 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 PHF21BQ96EK2 531 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 RHOXF2Q9BQY4 288 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 MRPL46Q9H2W6 279 aaKnown RBP15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 NOL11Q9H8H0 719 aaKnown RBP15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 USP9XQ93008 2570 aaPredicted RBP15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 CAPN14A8MX76 684 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 OTCP00480 354 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 FAM58BPP0C7Q3 252 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 NR2F6P10588 404 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 TNFRSF17Q02223 184 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 C3AR1Q16581 482 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 TECRLQ5HYJ1 363 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 TEX35Q5T0J7 233 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 HLA-DQA1Q5Y7H0 255 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 FRG2Q64ET8 278 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 ZNF787Q6DD87 383 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 ZNF793Q6ZN11 406 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 Q6ZPB1 254 aaPredicted RBP15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 UBE3DQ7Z6J8 389 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 ST13P4Q8IZP2 240 aaPredicted RBP15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 SLC15A4Q8N697 577 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 GOLM1Q8NBJ4 401 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 SENP5Q96HI0 755 aaPredicted RBP15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 GPR78Q96P69 363 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 FRG2BQ96QU4 278 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 RASL10BQ96S79 203 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 FAM173AQ9BQD7 235 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 TXLNGYQ9BZA5 131 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 SACM1LQ9NTJ5 587 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 PSME2Q9UL46 239 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 SNX6Q9UNH7 406 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 ZNF835Q9Y2P0 537 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 ASB1Q9Y576 335 aa15.39■□□□□ 0.05
PDLIM2-217ENST00000491330 POLEQ07864 2286 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 CCDC151A5D8V7 595 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 E9PLN8 166 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 PLPP1O14494 284 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 SEMA3DO95025 777 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 GPR75O95800 540 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 TBX6O95947 436 aaPredicted RBP15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 TPOP07202 933 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 COX6B1P14854 86 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 CNR1P21554 472 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 PIK3R1P27986 724 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 HTR1EP28566 365 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 SERPINB3P29508 390 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 DEKP35659 375 aaKnown RBP15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 HK2P52789 917 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 FOLH1Q04609 750 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 RASA2Q15283 850 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 MPEG1Q2M385 716 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 OR52E8Q6IFG1 317 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 FAM47EQ6ZV65 393 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 TAGAPQ8N103 731 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 AMER2Q8N7J2 671 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 ZFP62Q8NB50 900 aaPredicted RBP15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 C16orf52Q8NHV5 167 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 NUBPLQ8TB37 319 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 RIT1Q92963 219 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 MARVELD3Q96A59 401 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 VKORC1Q9BQB6 163 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 NTMT1Q9BV86 223 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 CNPPD1Q9BV87 410 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 DDX31Q9H8H2 851 aaKnown RBP15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 PSMC3IPQ9P2W1 217 aaPredicted RBP15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 XPR1Q9UBH6 696 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 TINAGQ9UJW2 476 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 PPT2Q9UMR5 302 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 STK38LQ9Y2H1 464 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 MEMO1Q9Y316 297 aa15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 SPTAN1Q13813 2472 aaKnown RBP15.38■□□□□ 0.05
PDLIM2-217ENST00000491330 OR6C76A6NM76 312 aa15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 ENO4A6NNW6 628 aa15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 TRIM49D1C9J1S8 452 aa15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 PROM1O43490 865 aa15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 FGF17O60258 216 aa15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 ZNF500O60304 480 aaPredicted RBP15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 GSTA1P08263 222 aa15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 GMPRP36959 345 aa15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 GPR85P60893 370 aa15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 NAA20P61599 178 aa15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 PPIAP62937 165 aaKnown RBP15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 RPP38P78345 283 aaKnown RBP15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 ID2Q02363 134 aa15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 ZNF267Q14586 743 aaPredicted RBP15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 RNF111Q6ZNA4 994 aa15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 SIAH3Q8IW03 269 aa15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 OR4N5Q8IXE1 308 aa15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 MYRIPQ8NFW9 859 aa15.37■□□□□ 0.05
PDLIM2-217ENST00000491330 AGAP11Q8TF27 550 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms