RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 ZNF696Q9H7X3 374 aa13.62□□□□□ -0.23
UFD1-209ENST00000489406 GTF3C3Q9Y5Q9 886 aa13.62□□□□□ -0.23
UFD1-209ENST00000489406 IKBKGQ9Y6K9 419 aa13.62□□□□□ -0.23
UFD1-209ENST00000489406 ELOA3DA6NLF2 546 aaPredicted RBP13.61□□□□□ -0.23
UFD1-209ENST00000489406 CD3EAPO15446 510 aaKnown RBP13.61□□□□□ -0.23
UFD1-209ENST00000489406 NDUFS3O75489 264 aa13.61□□□□□ -0.23
UFD1-209ENST00000489406 VENTXO95231 258 aa13.61□□□□□ -0.23
UFD1-209ENST00000489406 RPS3P23396 243 aaKnown RBP eCLIP13.61□□□□□ -0.23
UFD1-209ENST00000489406 SLC6A12P48065 614 aa13.61□□□□□ -0.23
UFD1-209ENST00000489406 MASP1P48740 699 aa13.61□□□□□ -0.23
UFD1-209ENST00000489406 GZMKP49863 264 aa13.61□□□□□ -0.23
UFD1-209ENST00000489406 SIRPAP78324 504 aa13.61□□□□□ -0.23
UFD1-209ENST00000489406 ACVR1Q04771 509 aa13.61□□□□□ -0.23
UFD1-209ENST00000489406 ELOA3BQ3SY89 546 aa13.61□□□□□ -0.23
UFD1-209ENST00000489406 BBS9Q3SYG4 887 aa13.61□□□□□ -0.23
UFD1-209ENST00000489406 FNDC7Q5VTL7 733 aa13.61□□□□□ -0.23
UFD1-209ENST00000489406 BICRALQ6AI39 1079 aa13.61□□□□□ -0.23
UFD1-209ENST00000489406 ADAM5Q6NVV9 412 aa13.61□□□□□ -0.23
UFD1-209ENST00000489406 SCIMPQ6UWF3 145 aa13.61□□□□□ -0.23
UFD1-209ENST00000489406 LRRC6Q86X45 466 aa13.61□□□□□ -0.23
UFD1-209ENST00000489406 CDKL3Q8IVW4 592 aaPredicted RBP13.61□□□□□ -0.23
UFD1-209ENST00000489406 ZNF610Q8N9Z0 462 aa13.61□□□□□ -0.23
UFD1-209ENST00000489406 ELOA3Q8NG57 546 aa13.61□□□□□ -0.23
UFD1-209ENST00000489406 OR52K1Q8NGK4 314 aa13.61□□□□□ -0.23
UFD1-209ENST00000489406 NT5CQ8TCD5 201 aa13.61□□□□□ -0.23
UFD1-209ENST00000489406 FAM118BQ9BPY3 351 aa13.61□□□□□ -0.23
UFD1-209ENST00000489406 NTMT1Q9BV86 223 aa13.61□□□□□ -0.23
UFD1-209ENST00000489406 PCBD2Q9H0N5 130 aa13.61□□□□□ -0.23
UFD1-209ENST00000489406 C17orf105B2RV13 164 aa13.6□□□□□ -0.23
UFD1-209ENST00000489406 C4orf51C9J302 202 aa13.6□□□□□ -0.23
UFD1-209ENST00000489406 CLOCKO15516 846 aa13.6□□□□□ -0.23
UFD1-209ENST00000489406 METTL18O95568 372 aa13.6□□□□□ -0.23
UFD1-209ENST00000489406 SERPING1P05155 500 aa13.6□□□□□ -0.23
UFD1-209ENST00000489406 SMIM10L1P0DMW3 83 aa13.6□□□□□ -0.23
UFD1-209ENST00000489406 SLC25A16P16260 332 aa13.6□□□□□ -0.23
UFD1-209ENST00000489406 CHMP24386 653 aa13.6□□□□□ -0.23
UFD1-209ENST00000489406 RUNX2Q13950 521 aa13.6□□□□□ -0.23
UFD1-209ENST00000489406 CCDC181Q5TID7 509 aa13.6□□□□□ -0.23
UFD1-209ENST00000489406 DARS2Q6PI48 645 aaKnown RBP13.6□□□□□ -0.23
UFD1-209ENST00000489406 SPNS2Q8IVW8 549 aa13.6□□□□□ -0.23
UFD1-209ENST00000489406 FAM47BQ8NA70 645 aa13.6□□□□□ -0.23
UFD1-209ENST00000489406 FAM83FQ8NEG4 500 aaPredicted RBP13.6□□□□□ -0.23
UFD1-209ENST00000489406 SLC35G2Q8TBE7 412 aa13.6□□□□□ -0.23
UFD1-209ENST00000489406 SMIM10Q96HG1 83 aa13.6□□□□□ -0.23
UFD1-209ENST00000489406 BIRC8Q96P09 236 aa13.6□□□□□ -0.23
UFD1-209ENST00000489406 ALOXE3Q9BYJ1 711 aa13.6□□□□□ -0.23
UFD1-209ENST00000489406 COPS7AQ9UBW8 275 aa13.6□□□□□ -0.23
UFD1-209ENST00000489406 MACROD2A1Z1Q3 448 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 TMEM89A2RUT3 159 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 CTAGE15A4D2H0 777 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 APOC4-APOC2K7ER74 178 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 TMPRSS2O15393 492 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 APOC2P02655 101 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 CRHP06850 196 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 CCDC166P0CW27 439 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 RBP3P10745 1247 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 SERPINB3P29508 390 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 SKIV2L2P42285 1042 aaKnown RBP13.59□□□□□ -0.23
UFD1-209ENST00000489406 KIR2DL2P43627 348 aaPredicted RBP13.59□□□□□ -0.23
UFD1-209ENST00000489406 DSCR9P59020 149 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 UBE2HP62256 183 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 BTN3A2P78410 334 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 LSM11P83369 360 aaKnown RBP eCLIP13.59□□□□□ -0.23
UFD1-209ENST00000489406 EXOC3L2Q2M3D2 409 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 PARP6Q2NL67 630 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 PGGHGQ32M88 737 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 TBCELQ5QJ74 424 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 ALKBH2Q6NS38 261 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 SBSNQ6UWP8 590 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 P4HA3Q7Z4N8 544 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 CTAGE6Q86UF2 777 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 SLC15A4Q8N697 577 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 ACTL9Q8TC94 416 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 ZNF721Q8TF20 911 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 PYCR2Q96C36 320 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 ZNF845Q96IR2 970 aaPredicted RBP13.59□□□□□ -0.23
UFD1-209ENST00000489406 RILPQ96NA2 401 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 ALG2Q9H553 416 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 VTI1BQ9UEU0 232 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 AMFRQ9UKV5 643 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 NENFQ9UMX5 172 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 RNF115Q9Y4L5 304 aa13.59□□□□□ -0.23
UFD1-209ENST00000489406 PRR14LQ5THK1 2151 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 WNK1Q9H4A3 2382 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 TRBC2A0A5B9 178 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 ANKRD33BA6NCL7 494 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 URADA6NGE7 173 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 PLOD2O00469 737 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 GNB5O14775 395 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 ZBTB14O43829 449 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 DLX3O60479 287 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 ALX3O95076 343 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 ETHE1O95571 254 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 FBXO45P0C2W1 286 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 PAMP19021 973 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 USF1P22415 310 aaPredicted RBP13.58□□□□□ -0.24
UFD1-209ENST00000489406 GCKP35557 465 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 MSH2P43246 934 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 STARP49675 285 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 CCR8P51685 355 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms