RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 RNFT1Q5M7Z0 435 aa23.22■■□□□ 1.31
HMGN1-217ENST00000489072 TTC19Q6DKK2 380 aaPredicted RBP23.22■■□□□ 1.31
HMGN1-217ENST00000489072 LETMD1Q6P1Q0 360 aa23.22■■□□□ 1.31
HMGN1-217ENST00000489072 DGAT2L6Q6ZPD8 337 aa23.22■■□□□ 1.31
HMGN1-217ENST00000489072 FJX1Q86VR8 437 aa23.22■■□□□ 1.31
HMGN1-217ENST00000489072 SIAH3Q8IW03 269 aa23.22■■□□□ 1.31
HMGN1-217ENST00000489072 TMEM156Q8N614 296 aa23.22■■□□□ 1.31
HMGN1-217ENST00000489072 CPSF7Q8N684 471 aaKnown RBP23.22■■□□□ 1.31
HMGN1-217ENST00000489072 TANKQ92844 425 aa23.22■■□□□ 1.31
HMGN1-217ENST00000489072 UCN3Q969E3 161 aa23.22■■□□□ 1.31
HMGN1-217ENST00000489072 SERPINI1Q99574 410 aa23.22■■□□□ 1.31
HMGN1-217ENST00000489072 MYOTQ9UBF9 498 aa23.22■■□□□ 1.31
HMGN1-217ENST00000489072 ZNF225Q9UK10 706 aa23.22■■□□□ 1.31
HMGN1-217ENST00000489072 YARS2Q9Y2Z4 477 aaKnown RBP23.22■■□□□ 1.31
HMGN1-217ENST00000489072 PCNX1Q96RV3 2341 aa23.22■■□□□ 1.31
HMGN1-217ENST00000489072 EML6Q6ZMW3 1958 aa23.21■■□□□ 1.31
HMGN1-217ENST00000489072 IQANK1A0A1B0GTG1 560 aa23.21■■□□□ 1.31
HMGN1-217ENST00000489072 GOLGA8RI6L899 631 aa23.21■■□□□ 1.31
HMGN1-217ENST00000489072 OR2J2O76002 312 aa23.21■■□□□ 1.31
HMGN1-217ENST00000489072 SEMA3DO95025 777 aa23.21■■□□□ 1.31
HMGN1-217ENST00000489072 CYP20A1Q6UW02 462 aa23.21■■□□□ 1.31
HMGN1-217ENST00000489072 MDGA2Q7Z553 956 aa23.21■■□□□ 1.31
HMGN1-217ENST00000489072 NUDT13Q86X67 352 aa23.21■■□□□ 1.31
HMGN1-217ENST00000489072 CYP4Z2PQ8N1L4 340 aa23.21■■□□□ 1.31
HMGN1-217ENST00000489072 FAM98AQ8NCA5 519 aaKnown RBP23.21■■□□□ 1.31
HMGN1-217ENST00000489072 ZNF721Q8TF20 911 aa23.21■■□□□ 1.31
HMGN1-217ENST00000489072 TMEM125Q96AQ2 219 aa23.21■■□□□ 1.31
HMGN1-217ENST00000489072 PPWD1Q96BP3 646 aaKnown RBP23.21■■□□□ 1.31
HMGN1-217ENST00000489072 GPR137Q96N19 417 aa23.21■■□□□ 1.31
HMGN1-217ENST00000489072 DGAT2Q96PD7 388 aa23.21■■□□□ 1.31
HMGN1-217ENST00000489072 FARSBQ9NSD9 589 aaKnown RBP23.21■■□□□ 1.31
HMGN1-217ENST00000489072 TBK1Q9UHD2 729 aa23.21■■□□□ 1.31
HMGN1-217ENST00000489072 CRYBG3Q68DQ2 2970 aa23.2■■□□□ 1.3
HMGN1-217ENST00000489072 GLOD5A6NK44 160 aa23.2■■□□□ 1.3
HMGN1-217ENST00000489072 NPIPA5E9PKD4 350 aa23.2■■□□□ 1.3
HMGN1-217ENST00000489072 WWP2O00308 870 aa23.2■■□□□ 1.3
HMGN1-217ENST00000489072 DLX3O60479 287 aa23.2■■□□□ 1.3
HMGN1-217ENST00000489072 AIFM1O95831 613 aa23.2■■□□□ 1.3
HMGN1-217ENST00000489072 OTCP00480 354 aa23.2■■□□□ 1.3
HMGN1-217ENST00000489072 TLX1P31314 330 aaPredicted RBP23.2■■□□□ 1.3
HMGN1-217ENST00000489072 BUD31P41223 144 aaPredicted RBP23.2■■□□□ 1.3
HMGN1-217ENST00000489072 HK2P52789 917 aa23.2■■□□□ 1.3
HMGN1-217ENST00000489072 HERVK_113P63132 956 aa23.2■■□□□ 1.3
HMGN1-217ENST00000489072 RNF4P78317 190 aa23.2■■□□□ 1.3
HMGN1-217ENST00000489072 IFT88Q13099 833 aa23.2■■□□□ 1.3
HMGN1-217ENST00000489072 UNC50Q53HI1 259 aa23.2■■□□□ 1.3
HMGN1-217ENST00000489072 SGO1Q5FBB7 561 aa23.2■■□□□ 1.3
HMGN1-217ENST00000489072 LCA5Q86VQ0 697 aa23.2■■□□□ 1.3
HMGN1-217ENST00000489072 EIF1ADQ8N9N8 165 aaKnown RBP23.2■■□□□ 1.3
HMGN1-217ENST00000489072 TRPC4APQ8TEL6 797 aa23.2■■□□□ 1.3
HMGN1-217ENST00000489072 RELTQ969Z4 430 aa23.2■■□□□ 1.3
HMGN1-217ENST00000489072 RASL10BQ96S79 203 aa23.2■■□□□ 1.3
HMGN1-217ENST00000489072 ERVK-6Q9BXR3 956 aa23.2■■□□□ 1.3
HMGN1-217ENST00000489072 MRPL1Q9BYD6 325 aaKnown RBP23.2■■□□□ 1.3
HMGN1-217ENST00000489072 NPIPA1Q9UND3 350 aa23.2■■□□□ 1.3
HMGN1-217ENST00000489072 A0A1B0GUH1 482 aa23.19■■□□□ 1.3
HMGN1-217ENST00000489072 FOXO6A8MYZ6 492 aa23.19■■□□□ 1.3
HMGN1-217ENST00000489072 HRKO00198 91 aa23.19■■□□□ 1.3
HMGN1-217ENST00000489072 OR6B1O95007 311 aa23.19■■□□□ 1.3
HMGN1-217ENST00000489072 SHBGP04278 402 aa23.19■■□□□ 1.3
HMGN1-217ENST00000489072 NR2F6P10588 404 aa23.19■■□□□ 1.3
HMGN1-217ENST00000489072 PYGBP11216 843 aa23.19■■□□□ 1.3
HMGN1-217ENST00000489072 COX7A2P14406 83 aa23.19■■□□□ 1.3
HMGN1-217ENST00000489072 TAC1P20366 129 aa23.19■■□□□ 1.3
HMGN1-217ENST00000489072 HSD17B3P37058 310 aa23.19■■□□□ 1.3
HMGN1-217ENST00000489072 ZNF678Q5SXM1 525 aa23.19■■□□□ 1.3
HMGN1-217ENST00000489072 C10orf62Q5T681 223 aaPredicted RBP23.19■■□□□ 1.3
HMGN1-217ENST00000489072 MAMDC2Q7Z304 686 aaPredicted RBP23.19■■□□□ 1.3
HMGN1-217ENST00000489072 SULF2Q8IWU5 870 aa23.19■■□□□ 1.3
HMGN1-217ENST00000489072 C7orf57Q8NEG2 295 aa23.19■■□□□ 1.3
HMGN1-217ENST00000489072 OR8K3Q8NH51 312 aa23.19■■□□□ 1.3
HMGN1-217ENST00000489072 ACMSDQ8TDX5 336 aa23.19■■□□□ 1.3
HMGN1-217ENST00000489072 DOK4Q8TEW6 326 aa23.19■■□□□ 1.3
HMGN1-217ENST00000489072 SENP5Q96HI0 755 aaPredicted RBP23.19■■□□□ 1.3
HMGN1-217ENST00000489072 TMEM237Q96Q45 408 aa23.19■■□□□ 1.3
HMGN1-217ENST00000489072 ELOVL6Q9H5J4 265 aa23.19■■□□□ 1.3
HMGN1-217ENST00000489072 KLF13Q9Y2Y9 288 aaPredicted RBP23.19■■□□□ 1.3
HMGN1-217ENST00000489072 ZNF354AO60765 605 aaPredicted RBP23.18■■□□□ 1.3
HMGN1-217ENST00000489072 ZG16O60844 167 aa23.18■■□□□ 1.3
HMGN1-217ENST00000489072 OR4F21O95013 312 aa23.18■■□□□ 1.3
HMGN1-217ENST00000489072 GPR75O95800 540 aa23.18■■□□□ 1.3
HMGN1-217ENST00000489072 PDYNP01213 254 aa23.18■■□□□ 1.3
HMGN1-217ENST00000489072 IGKV3-11P04433 115 aa23.18■■□□□ 1.3
HMGN1-217ENST00000489072 ALOX15P16050 662 aaPredicted RBP23.18■■□□□ 1.3
HMGN1-217ENST00000489072 SOX3P41225 446 aa23.18■■□□□ 1.3
HMGN1-217ENST00000489072 MEOX1P50221 254 aa23.18■■□□□ 1.3
HMGN1-217ENST00000489072 PER3P56645 1201 aa23.18■■□□□ 1.3
HMGN1-217ENST00000489072 PLIN5Q00G26 463 aa23.18■■□□□ 1.3
HMGN1-217ENST00000489072 CLCQ05315 142 aa23.18■■□□□ 1.3
HMGN1-217ENST00000489072 MYRIPQ8NFW9 859 aa23.18■■□□□ 1.3
HMGN1-217ENST00000489072 RBM18Q96H35 190 aaKnown RBP23.18■■□□□ 1.3
HMGN1-217ENST00000489072 TEX10Q9NXF1 929 aaPredicted RBP23.18■■□□□ 1.3
HMGN1-217ENST00000489072 CELSR2Q9HCU4 2923 aa23.17■■□□□ 1.3
HMGN1-217ENST00000489072 TRGV8A0A0C4DH27 118 aa23.17■■□□□ 1.3
HMGN1-217ENST00000489072 A0A1W2PPM1 405 aa23.17■■□□□ 1.3
HMGN1-217ENST00000489072 A0A1W2PS29 197 aa23.17■■□□□ 1.3
HMGN1-217ENST00000489072 A8MVJ9 347 aa23.17■■□□□ 1.3
HMGN1-217ENST00000489072 PGRMC2O15173 223 aa23.17■■□□□ 1.3
HMGN1-217ENST00000489072 PEX1O43933 1283 aa23.17■■□□□ 1.3
HMGN1-217ENST00000489072 KLK1P06870 262 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms