RNA–Protein interactions for RNA: ENST00000487989.1

PFKFB3-213, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 2

Gene PFKFB3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-213ENST00000487989 NCLNQ969V3 563 aa13.21□□□□□ -0.29
PFKFB3-213ENST00000487989 RBM18Q96H35 190 aaKnown RBP13.21□□□□□ -0.29
PFKFB3-213ENST00000487989 DGAT2Q96PD7 388 aa13.21□□□□□ -0.29
PFKFB3-213ENST00000487989 KCNA7Q96RP8 456 aa13.21□□□□□ -0.29
PFKFB3-213ENST00000487989 TMEM109Q9BVC6 243 aa13.21□□□□□ -0.29
PFKFB3-213ENST00000487989 MID1IP1Q9NPA3 183 aa13.21□□□□□ -0.29
PFKFB3-213ENST00000487989 AGPAT4Q9NRZ5 378 aa13.21□□□□□ -0.29
PFKFB3-213ENST00000487989 MKS1Q9NXB0 559 aa13.21□□□□□ -0.29
PFKFB3-213ENST00000487989 ANKRD10Q9NXR5 420 aa13.21□□□□□ -0.29
PFKFB3-213ENST00000487989 VPS29Q9UBQ0 182 aa13.21□□□□□ -0.29
PFKFB3-213ENST00000487989 MID2Q9UJV3 735 aa13.21□□□□□ -0.29
PFKFB3-213ENST00000487989 ADAM29Q9UKF5 820 aa13.21□□□□□ -0.29
PFKFB3-213ENST00000487989 NTNG1Q9Y2I2 539 aa13.21□□□□□ -0.29
PFKFB3-213ENST00000487989 TIMM22Q9Y584 194 aa13.21□□□□□ -0.29
PFKFB3-213ENST00000487989 CCDC151A5D8V7 595 aa13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 C17orf105B2RV13 164 aa13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 TCP11X1B4DZS4 312 aa13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 PRAMEF2O60811 474 aa13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 SPAG7O75391 227 aa13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 ZFAND5O76080 213 aa13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 ZIC2O95409 532 aaPredicted RBP13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 GPR75O95800 540 aa13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 AIFM1O95831 613 aa13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 COX7A2P14406 83 aa13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 GNLYP22749 145 aa13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 STT3AP46977 705 aa13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 MAPK12P53778 367 aa13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 MLF1P58340 268 aa13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 OC90Q02509 493 aaPredicted RBP13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 TBL3Q12788 808 aaKnown RBP13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 CSTF3Q12996 717 aaKnown RBP13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 LIPMQ5VYY2 423 aa13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 FRMD7Q6ZUT3 714 aa13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 C10orf107Q8IVU9 208 aa13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 GBP7Q8N8V2 638 aaPredicted RBP13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 GRHL3Q8TE85 626 aa13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 UCN3Q969E3 161 aa13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 PPWD1Q96BP3 646 aaKnown RBP13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 SMC6Q96SB8 1091 aa13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 OR8D2Q9GZM6 311 aa13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 TEX10Q9NXF1 929 aaPredicted RBP13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 ZNF223Q9UK11 482 aaPredicted RBP13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 NBASA2RRP1 2371 aa13.2□□□□□ -0.3
PFKFB3-213ENST00000487989 H3BQF6 201 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 FCHO1O14526 889 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 PGRMC2O15173 223 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 GUCY1B2O75343 617 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 DDAH2O95865 285 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 CHN1P15882 459 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 ALOX15P16050 662 aaPredicted RBP13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 UQCRFS1P47985 274 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 HTR6P50406 440 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 PLIN5Q00G26 463 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 GALNT1Q10472 559 aaPredicted RBP13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 PCLAFQ15004 111 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 NR6A1Q15406 480 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 OR1C1Q15619 314 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 KRT71Q3SY84 523 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 ZNF766Q5HY98 468 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 NDUFAF5Q5TEU4 345 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 SPINK14Q6IE38 97 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 SCIMPQ6UWF3 145 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 FAM180AQ6UWF9 173 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 HSDL2Q6YN16 418 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 ARMC10Q8N2F6 343 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 C1orf52Q8N6N3 182 aaKnown RBP13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 HORMAD2Q8N7B1 307 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 ZNF321PQ8N8H1 164 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 SLC2A12Q8TD20 617 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 SIGLEC12Q96PQ1 595 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 FAM111AQ96PZ2 611 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 BARD1Q99728 777 aaKnown RBP13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 SLC17A7Q9P2U7 560 aa13.19□□□□□ -0.3
PFKFB3-213ENST00000487989 CDK2AP1O14519 115 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 DYRK3O43781 588 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 PRKNO60260 465 aaPredicted RBP13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 OR10H2O60403 315 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 TRIM13O60858 407 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 CRCPO75575 148 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 FOXA1P55317 472 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 HMGCS1Q01581 520 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 ZNF844Q08AG5 666 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 ASPHQ12797 758 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 ZNF468Q5VIY5 522 aaPredicted RBP13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 OR52E8Q6IFG1 317 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 DGAT2L6Q6ZPD8 337 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 ST13P4Q8IZP2 240 aaPredicted RBP13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 MDS2Q8NDY4 140 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 OR4K14Q8NGD5 310 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 TCP10LQ8TDR4 215 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 CHTF18Q8WVB6 975 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 FAR1Q8WVX9 515 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 SREK1Q8WXA9 508 aaKnown RBP13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 SENP5Q96HI0 755 aaPredicted RBP13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 TAAR6Q96RI8 345 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 PELOQ9BRX2 385 aaKnown RBP13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 GATA5Q9BWX5 397 aaPredicted RBP13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 ACPTQ9BZG2 426 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 SHCBP1LQ9BZQ2 653 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 KLHL1Q9NR64 748 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms